FFCP PHASE1:Hg19::chr18:45456930..45456967,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:45456930..45456967,- to FFCP PHASE1:Hg19::chr18:45456930..45456967,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4087 | |EntrezGene=4087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6768 | |HGNC=6768 | ||
|TSSclassifier=strong | |||
|UniProt=Q15796 | |UniProt=Q15796 | ||
|association_with_transcript=0bp_to_ENST00000262160_5end | |||
|cluster_id=chr18:45456930..45456967,- | |||
|description=CAGE_peak_2_at_SMAD2_5end | |||
|id=chr18:45456930..45456967,- | |||
|ontology_enrichment_celltype=CL:0000542!2.06e-14!53;CL:0000051!2.06e-14!53;CL:0000838!2.92e-14!52;CL:0000084!7.53e-13!25;CL:0000827!7.53e-13!25;CL:0000791!2.52e-11!18;CL:0000789!2.52e-11!18;CL:0002420!2.52e-11!18;CL:0002419!2.52e-11!18;CL:0000790!2.52e-11!18;CL:0000625!4.50e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.23e-13;25!CL:0000791;3.09e-11;18!CL:0000789;3.09e-11;18!CL:0002419;3.09e-11;18!CL:0000542;2.88e-08;53!CL:0000625;6.17e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.05e-14,53;CL:0000051,2.05e-14,53;CL:0000838,2.92e-14,52;CL:0000084,7.51e-13,25;CL:0000827,7.51e-13,25;CL:0000791,2.51e-11,18;CL:0000789,2.51e-11,18;CL:0002420,2.51e-11,18;CL:0002419,2.51e-11,18;CL:0000790,2.51e-11,18;CL:0000625,4.49e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.09e-11;18!CL:0000051;2.88e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SMAD2 | |||
}} | }} |
Latest revision as of 16:03, 19 September 2015
Short description: | p2@SMAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262160_5end |
EntrezGene: | SMAD2 |
HGNC: | 6768 |
UniProt: | Q15796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.05e-14 | 53 |
common lymphoid progenitor | 2.05e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.92e-14 | 52 |
T cell | 7.51e-13 | 25 |
pro-T cell | 7.51e-13 | 25 |
mature alpha-beta T cell | 2.51e-11 | 18 |
alpha-beta T cell | 2.51e-11 | 18 |
immature T cell | 2.51e-11 | 18 |
mature T cell | 2.51e-11 | 18 |
immature alpha-beta T cell | 2.51e-11 | 18 |
CD8-positive, alpha-beta T cell | 4.49e-07 | 11 |