FFCP PHASE1:Hg19::chr7:79998842..79998855,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:79998842..79998855,+
|short_description=p25@CD36
|description=CAGE_peak_25_at_CD36_5end
|association_with_transcript=-35bp_to_ENST00000435819,uc003uhc.2_5e...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt=P16671 | |UniProt=P16671 | ||
|association_with_transcript=-35bp_to_ENST00000435819,uc003uhc.2_5end | |||
|cluster_id=chr7:79998842..79998855,+ | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_25_at_CD36_5end | |||
|id=chr7:79998842..79998855,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.11e-20!6;CL:0002138!1.11e-20!6;CL:0005022!1.11e-20!6;CL:0002139!2.24e-18!24;CL:0002144!1.32e-15!3;CL:0000115!1.76e-14!35;CL:0002078!4.67e-11!44;CL:0000213!4.93e-08!57;CL:0000215!4.93e-08!57;CL:0002618!6.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002144;3.03e-84;3!CL:0002138;2.17e-75;6!CL:0002139;1.82e-57;24!CL:0000115;1.18e-27;36!CL:0002078;5.41e-25;45!CL:0000071;8.27e-15;18!CL:0000213;9.92e-15;58!CL:0000215;9.92e-15;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,3.03e-84,3;CL:0005020,2.17e-75,6;CL:0002138,2.17e-75,6;CL:0005022,2.17e-75,6;CL:0002139,1.82e-57,24;CL:0000115,1.73e-38,36;CL:0002078,6.99e-31,45;CL:0000213,4.74e-24,58;CL:0000215,4.74e-24,58;CL:0000071,8.27e-15,18;CL:0002546,8.27e-15,18;CL:0000222,1.14e-11,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.17e-75;6!CL:0002546;8.27e-15;18!CL:0000222;7.45e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.14e-17!10;UBERON:0001915!1.32e-15!3;UBERON:0001982!1.32e-15!3;UBERON:0001473!1.94e-15!8;UBERON:0004536!1.94e-15!8;UBERON:0006558!1.94e-15!8;UBERON:0000341!1.92e-10!2;UBERON:0003127!4.23e-10!2;UBERON:0000055!1.51e-07!69;UBERON:0007023!1.96e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.03e-84;3!UBERON:0001915;3.03e-84;3!UBERON:0001982;3.03e-84;3!UBERON:0001473;9.15e-57;8!UBERON:0004536;9.15e-57;8!UBERON:0006558;9.15e-57;8!UBERON:0002465;1.40e-45;10!UBERON:0000055;6.30e-18;65!UBERON:0002405;2.59e-17;27!UBERON:0004638;8.27e-15;18!UBERON:0001986;8.27e-15;18!UBERON:0004852;8.27e-15;18!UBERON:0000487;2.96e-12;22!UBERON:0002049;2.42e-11;75!UBERON:0007798;2.42e-11;75!UBERON:0006914;7.16e-11;25!UBERON:0002193;1.91e-10;42!UBERON:0000490;7.94e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,3.03e-84,3;UBERON:0001915,3.03e-84,3;UBERON:0001982,3.03e-84,3;UBERON:0001473,9.15e-57,8;UBERON:0004536,9.15e-57,8;UBERON:0006558,9.15e-57,8;UBERON:0002465,1.40e-45,10;UBERON:0000055,1.45e-20,68;UBERON:0002049,5.71e-18,78;UBERON:0007798,5.71e-18,78;UBERON:0004638,8.27e-15,18;UBERON:0001986,8.27e-15,18;UBERON:0004852,8.27e-15,18;UBERON:0004535,6.23e-13,109;UBERON:0001009,1.36e-12,112;UBERON:0000487,2.96e-12,22;UBERON:0006914,7.16e-11,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,2.00832367658802,2.01414658554573,3.04108842287405,1.95249646038536,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6408565970094,2.77791307545966,8.18092854608773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.176512253383001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.445530107947154,0.404234377916439,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,2.00832367658802,2.01414658554573,3.04108842287405,1.95249646038536,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6408565970094,2.77791307545966,8.18092854608773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.176512253383001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.445530107947154,0.404234377916439,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p25@CD36 | |||
}} | }} |
Latest revision as of 16:17, 19 September 2015
Short description: | p25@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CD36_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | -35bp_to_ENST00000435819, uc003uhc.2_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | P16671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 3.03e-84 | 3 |
lymphangioblast | 2.17e-75 | 6 |
endothelial cell of lymphatic vessel | 2.17e-75 | 6 |
vascular lymphangioblast | 2.17e-75 | 6 |
endothelial cell of vascular tree | 1.82e-57 | 24 |
endothelial cell | 1.73e-38 | 36 |
meso-epithelial cell | 6.99e-31 | 45 |
lining cell | 4.74e-24 | 58 |
barrier cell | 4.74e-24 | 58 |
blood vessel endothelial cell | 8.27e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.27e-15 | 18 |
mesodermal cell | 1.14e-11 | 121 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 3.03e-84 | 3 |
endothelium of capillary | 3.03e-84 | 3 |
capillary | 3.03e-84 | 3 |
lymphatic vessel | 9.15e-57 | 8 |
lymph vasculature | 9.15e-57 | 8 |
lymphatic part of lymphoid system | 9.15e-57 | 8 |
lymphoid system | 1.40e-45 | 10 |
vessel | 1.45e-20 | 68 |
vasculature | 5.71e-18 | 78 |
vascular system | 5.71e-18 | 78 |
blood vessel endothelium | 8.27e-15 | 18 |
endothelium | 8.27e-15 | 18 |
cardiovascular system endothelium | 8.27e-15 | 18 |
cardiovascular system | 6.23e-13 | 109 |
circulatory system | 1.36e-12 | 112 |
simple squamous epithelium | 2.96e-12 | 22 |
squamous epithelium | 7.16e-11 | 25 |