FFCP PHASE1:Hg19::chr12:58159297..58159310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1594 | |EntrezGene=1594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2606 | |HGNC=2606 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWR7 | |UniProt=F8VWR7 | ||
|association_with_transcript=157bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | |association_with_transcript=157bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | ||
|cluster_id=chr12:58159297..58159310,- | |||
|description=CAGE_peak_5_at_CYP27B1_5end | |description=CAGE_peak_5_at_CYP27B1_5end | ||
|id=chr12:58159297..58159310,- | |id=chr12:58159297..58159310,- | ||
|ontology_enrichment_celltype=CL:0000066!4.35e-24!254;CL:0000223!6.20e-23!59;CL:0002076!8.27e-23!43;CL:0002368!4.88e-20!13;CL:0002202!2.86e-13!9;CL:0002632!2.86e-13!9;CL:0002159!5.19e-09!13;CL:0002251!3.60e-08!21;CL:0002321!6.10e-08!248;CL:0000082!8.33e-08!19;CL:0000220!4.13e-07!246;CL:0000068!4.76e-07!3;CL:0000069!4.76e-07!3;CL:0000307!4.76e-07!3;CL:0000377!4.76e-07!3;CL:0002328!5.55e-07!3 | |ontology_enrichment_celltype=CL:0000066!4.35e-24!254;CL:0000223!6.20e-23!59;CL:0002076!8.27e-23!43;CL:0002368!4.88e-20!13;CL:0002202!2.86e-13!9;CL:0002632!2.86e-13!9;CL:0002159!5.19e-09!13;CL:0002251!3.60e-08!21;CL:0002321!6.10e-08!248;CL:0000082!8.33e-08!19;CL:0000220!4.13e-07!246;CL:0000068!4.76e-07!3;CL:0000069!4.76e-07!3;CL:0000307!4.76e-07!3;CL:0000377!4.76e-07!3;CL:0002328!5.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.02e-32;13!CL:0000575;1.74e-24;2!CL:0002159;3.37e-21;14!CL:0002202;4.37e-21;9!CL:0002632;4.37e-21;9!CL:0000307;8.54e-17;3!CL:0002328;2.03e-16;3!CL:0002327;9.46e-13;4!CL:0000312;1.54e-10;5!CL:0002076;3.66e-09;42!CL:0000240;6.26e-09;6!CL:0000311;6.26e-09;6!CL:0000079;6.26e-09;6!CL:0000237;6.26e-09;6!CL:0002077;1.49e-08;34!CL:0002535;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.32e-32,13;CL:0000575,1.29e-24,2;CL:0002159,3.30e-21,14;CL:0002202,4.16e-21,9;CL:0002632,4.16e-21,9;CL:0000068,1.08e-16,3;CL:0000069,1.08e-16,3;CL:0000307,1.08e-16,3;CL:0000377,1.08e-16,3;CL:0002328,1.49e-16,3;CL:0002076,4.61e-13,42;CL:0002327,1.16e-12,4;CL:0000312,1.69e-10,5;CL:0000223,2.73e-09,58;CL:0000240,6.77e-09,6;CL:0000311,6.77e-09,6;CL:0000079,6.77e-09,6;CL:0000237,6.77e-09,6;CL:0000036,6.77e-09,6;CL:0000357,6.77e-09,6;CL:0000114,6.77e-09,6;CL:0002077,1.07e-08,34;CL:0000066,1.71e-08,253;CL:0002535,5.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;8.54e-17;3!CL:0000357;6.26e-09;6!CL:0000114;6.26e-09;6 | |||
|ontology_enrichment_disease=DOID:305!2.53e-12!106;DOID:0050687!7.53e-10!143 | |ontology_enrichment_disease=DOID:305!2.53e-12!106;DOID:0050687!7.53e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:3347;6.05e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,7.68e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0005911!7.48e-19!82;UBERON:0004119!2.27e-15!169;UBERON:0000925!2.27e-15!169;UBERON:0006595!2.27e-15!169;UBERON:0005153!1.04e-11!37;UBERON:0001007!1.15e-11!155;UBERON:0001555!1.15e-11!155;UBERON:0007026!1.15e-11!155;UBERON:0003929!1.04e-10!54;UBERON:0005157!1.23e-10!51;UBERON:0001004!3.90e-09!72;UBERON:0005178!1.14e-08!34;UBERON:0002224!1.14e-08!34;UBERON:0005181!2.60e-08!35;UBERON:0004807!3.02e-08!28;UBERON:0000344!3.86e-08!12;UBERON:0007196!7.02e-08!14;UBERON:0001558!7.02e-08!14;UBERON:0004802!8.33e-08!19;UBERON:0000115!8.33e-08!19;UBERON:0000065!1.01e-07!53;UBERON:0002048!1.11e-07!22;UBERON:0000117!1.11e-07!22;UBERON:0000171!1.11e-07!22;UBERON:0000170!1.11e-07!22;UBERON:0005597!1.11e-07!22;UBERON:0000118!1.11e-07!22;UBERON:0000077!1.53e-07!130;UBERON:0000485!3.02e-07!9;UBERON:0000466!3.40e-07!126;UBERON:0004921!5.44e-07!129;UBERON:0004185!5.44e-07!129;UBERON:0004815!5.55e-07!3;UBERON:0002031!5.55e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.03e-16;3!UBERON:0002031;2.03e-16;3!UBERON:0007196;8.98e-13;15!UBERON:0001558;8.98e-13;15!UBERON:0001911;9.46e-13;4!UBERON:0000964;9.46e-13;4!UBERON:0010409;9.46e-13;4!UBERON:0002185;3.12e-10;5!UBERON:0003126;1.02e-07;7!UBERON:0001005;1.02e-07;7!UBERON:0000485;1.47e-07;7!UBERON:0000065;2.44e-07;44!UBERON:0006955;4.17e-07;2!UBERON:0004801;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.49e-16,3;UBERON:0002031,1.49e-16,3;UBERON:0000964,8.17e-13,4;UBERON:0010409,8.17e-13,4;UBERON:0004348,8.17e-13,4;UBERON:0005427,8.17e-13,4;UBERON:0007196,8.72e-13,15;UBERON:0001558,8.72e-13,15;UBERON:0001911,1.16e-12,4;UBERON:0005333,1.16e-12,4;UBERON:0008425,1.16e-12,4;UBERON:0005311,1.16e-12,4;UBERON:0002185,2.59e-10,5;UBERON:0005157,1.22e-08,47;UBERON:0003126,1.13e-07,7;UBERON:0001005,1.13e-07,7;UBERON:0000065,1.76e-07,54;UBERON:0001004,3.85e-07,74;UBERON:0006955,5.60e-07,2;UBERON:0004801,5.60e-07,2;UBERON:0000076,9.11e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,1.47901604066715,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,2.5500670180478,1.48313777113772,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,1.43402297694502,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.878002283269004,2.24803506515239,2.21163739305588,0.555530670951178,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,0,0.283550194484773,1.25381931783988,2.3250715081117,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.661139661443912,1.72971060628596,1.91419068741876,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,1.34060455107157,5.44454924306613,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.824019371133798,0,0,0,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.787139999965761,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,1.21882889212564,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0.171594997861965,0.432164393964449,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.688992370603241,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0.328370082997356,1.5334921960688,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0.106691729694141,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,1.3807198521202,0,0,0,0,0,0.818859587550484,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590969204419841,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.452888530700021,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0.244209805832924,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p5@CYP27B1 | |short_description=p5@CYP27B1 | ||
}} | }} |
Latest revision as of 16:38, 19 September 2015
Short description: | p5@CYP27B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYP27B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 157bp_to_ENST00000546567, ENST00000547451, uc001sqb.1, uc001sqc.1_5end |
EntrezGene: | CYP27B1 |
HGNC: | 2606 |
UniProt: | F8VWR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.32e-32 | 13 |
corneal epithelial cell | 1.29e-24 | 2 |
general ecto-epithelial cell | 3.30e-21 | 14 |
epithelial cell of tracheobronchial tree | 4.16e-21 | 9 |
epithelial cell of lower respiratory tract | 4.16e-21 | 9 |
duct epithelial cell | 1.08e-16 | 3 |
branched duct epithelial cell | 1.08e-16 | 3 |
tracheal epithelial cell | 1.08e-16 | 3 |
tracheoblast | 1.08e-16 | 3 |
bronchial epithelial cell | 1.49e-16 | 3 |
endo-epithelial cell | 4.61e-13 | 42 |
mammary gland epithelial cell | 1.16e-12 | 4 |
keratinocyte | 1.69e-10 | 5 |
endodermal cell | 2.73e-09 | 58 |
stratified squamous epithelial cell | 6.77e-09 | 6 |
keratin accumulating cell | 6.77e-09 | 6 |
stratified epithelial cell | 6.77e-09 | 6 |
keratinizing barrier epithelial cell | 6.77e-09 | 6 |
epithelial fate stem cell | 6.77e-09 | 6 |
stratified epithelial stem cell | 6.77e-09 | 6 |
surface ectodermal cell | 6.77e-09 | 6 |
ecto-epithelial cell | 1.07e-08 | 34 |
epithelial cell | 1.71e-08 | 253 |
epithelial cell of cervix | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.49e-16 | 3 |
epithelium of bronchus | 1.49e-16 | 3 |
cornea | 8.17e-13 | 4 |
eye surface | 8.17e-13 | 4 |
optic eminence | 8.17e-13 | 4 |
corneal primordium | 8.17e-13 | 4 |
tracheobronchial tree | 8.72e-13 | 15 |
lower respiratory tract | 8.72e-13 | 15 |
mammary gland | 1.16e-12 | 4 |
mammary bud | 1.16e-12 | 4 |
mammary ridge | 1.16e-12 | 4 |
mammary placode | 1.16e-12 | 4 |
bronchus | 2.59e-10 | 5 |
epithelial fold | 1.22e-08 | 47 |
trachea | 1.13e-07 | 7 |
respiratory airway | 1.13e-07 | 7 |
respiratory tract | 1.76e-07 | 54 |
respiratory system | 3.85e-07 | 74 |
uterine epithelium | 5.60e-07 | 2 |
cervix epithelium | 5.60e-07 | 2 |
external ectoderm | 9.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 7.68e-13 | 1 |