FFCP PHASE1:Hg19::chr11:66824346..66824359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29984 | |EntrezGene=29984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=670 | |HGNC=670 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIG5 | |UniProt=E9PIG5 | ||
|association_with_transcript=0bp_to_ENST00000532559_5end | |association_with_transcript=0bp_to_ENST00000532559_5end | ||
|cluster_id=chr11:66824346..66824359,+ | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_3_at_RHOD_5end | |description=CAGE_peak_3_at_RHOD_5end | ||
|id=chr11:66824346..66824359,+ | |id=chr11:66824346..66824359,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.35e-30!254;CL:0002076!1.17e-15!43;CL:0000223!1.78e-13!59;CL:0000220!1.10e-12!246;CL:0002321!1.31e-12!248;CL:0002251!8.24e-09!21;CL:0002368!2.72e-07!13;CL:0000548!8.92e-07!679;CL:0000004!8.92e-07!679;CL:0000255!8.92e-07!679 | |ontology_enrichment_celltype=CL:0000066!1.35e-30!254;CL:0002076!1.17e-15!43;CL:0000223!1.78e-13!59;CL:0000220!1.10e-12!246;CL:0002321!1.31e-12!248;CL:0002251!8.24e-09!21;CL:0002368!2.72e-07!13;CL:0000548!8.92e-07!679;CL:0000004!8.92e-07!679;CL:0000255!8.92e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.41e-13;42!CL:0002251;4.27e-10;20!CL:0000349;6.05e-09;19!CL:0002368;1.18e-08;13!CL:0002159;2.12e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-30,253;CL:0002076,2.55e-17,42;CL:0000223,7.40e-14,58;CL:0002251,4.31e-10,20;CL:0002321,1.72e-09,250;CL:0000349,6.45e-09,19;CL:0002368,1.18e-08,13;CL:0000076,9.30e-08,63;CL:0002159,1.46e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;5.12e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.71e-08!106 | |ontology_enrichment_disease=DOID:305!1.71e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.76e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.55e-08,106;DOID:1749,2.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-17!169;UBERON:0000925!1.92e-17!169;UBERON:0006595!1.92e-17!169;UBERON:0003104!5.02e-14!238;UBERON:0009142!5.02e-14!238;UBERON:0000468!1.76e-13!659;UBERON:0001007!7.00e-13!155;UBERON:0001555!7.00e-13!155;UBERON:0007026!7.00e-13!155;UBERON:0000481!1.42e-12!347;UBERON:0002100!3.39e-12!216;UBERON:0000077!8.40e-12!130;UBERON:0000475!2.22e-11!365;UBERON:0001004!4.68e-11!72;UBERON:0000064!1.95e-10!219;UBERON:0005256!2.00e-09!143;UBERON:0004921!3.29e-09!129;UBERON:0004185!3.29e-09!129;UBERON:0000467!3.44e-09!625;UBERON:0000480!5.29e-09!626;UBERON:0001048!6.46e-09!168;UBERON:0001444!8.09e-09!48;UBERON:0009569!1.96e-08!113;UBERON:0005631!2.16e-08!14;UBERON:0000158!2.16e-08!14;UBERON:0000065!2.21e-08!53;UBERON:0000063!3.32e-08!97;UBERON:0003102!3.50e-08!95;UBERON:0000466!4.12e-08!126;UBERON:0000161!6.35e-08!35;UBERON:0004923!8.88e-08!57;UBERON:0000915!1.26e-07!52;UBERON:0001041!1.58e-07!98;UBERON:0000062!3.48e-07!511;UBERON:0000922!3.64e-07!612;UBERON:0005911!3.66e-07!82;UBERON:0000483!4.50e-07!309;UBERON:0000119!4.93e-07!312;UBERON:0000923!5.84e-07!604;UBERON:0005291!5.84e-07!604;UBERON:0006598!5.84e-07!604;UBERON:0002532!5.84e-07!604;UBERON:0002050!5.86e-07!605;UBERON:0005423!5.86e-07!605;UBERON:0000072!5.99e-07!46 | |ontology_enrichment_uberon=UBERON:0004119!1.92e-17!169;UBERON:0000925!1.92e-17!169;UBERON:0006595!1.92e-17!169;UBERON:0003104!5.02e-14!238;UBERON:0009142!5.02e-14!238;UBERON:0000468!1.76e-13!659;UBERON:0001007!7.00e-13!155;UBERON:0001555!7.00e-13!155;UBERON:0007026!7.00e-13!155;UBERON:0000481!1.42e-12!347;UBERON:0002100!3.39e-12!216;UBERON:0000077!8.40e-12!130;UBERON:0000475!2.22e-11!365;UBERON:0001004!4.68e-11!72;UBERON:0000064!1.95e-10!219;UBERON:0005256!2.00e-09!143;UBERON:0004921!3.29e-09!129;UBERON:0004185!3.29e-09!129;UBERON:0000467!3.44e-09!625;UBERON:0000480!5.29e-09!626;UBERON:0001048!6.46e-09!168;UBERON:0001444!8.09e-09!48;UBERON:0009569!1.96e-08!113;UBERON:0005631!2.16e-08!14;UBERON:0000158!2.16e-08!14;UBERON:0000065!2.21e-08!53;UBERON:0000063!3.32e-08!97;UBERON:0003102!3.50e-08!95;UBERON:0000466!4.12e-08!126;UBERON:0000161!6.35e-08!35;UBERON:0004923!8.88e-08!57;UBERON:0000915!1.26e-07!52;UBERON:0001041!1.58e-07!98;UBERON:0000062!3.48e-07!511;UBERON:0000922!3.64e-07!612;UBERON:0005911!3.66e-07!82;UBERON:0000483!4.50e-07!309;UBERON:0000119!4.93e-07!312;UBERON:0000923!5.84e-07!604;UBERON:0005291!5.84e-07!604;UBERON:0006598!5.84e-07!604;UBERON:0002532!5.84e-07!604;UBERON:0002050!5.86e-07!605;UBERON:0005423!5.86e-07!605;UBERON:0000072!5.99e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.56e-07;24!UBERON:0005631;5.93e-07;10!UBERON:0000158;5.93e-07;10 | |||
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| ||
|short_description=p3@RHOD | |short_description=p3@RHOD | ||
}} | }} |
Latest revision as of 16:42, 19 September 2015
Short description: | p3@RHOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RHOD_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000532559_5end |
EntrezGene: | RHOD |
HGNC: | 670 |
UniProt: | E9PIG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-30 | 253 |
endo-epithelial cell | 2.55e-17 | 42 |
endodermal cell | 7.40e-14 | 58 |
epithelial cell of alimentary canal | 4.31e-10 | 20 |
embryonic cell | 1.72e-09 | 250 |
extraembryonic cell | 6.45e-09 | 19 |
respiratory epithelial cell | 1.18e-08 | 13 |
squamous epithelial cell | 9.30e-08 | 63 |
general ecto-epithelial cell | 1.46e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.50e-15 | 160 |
endoderm | 7.50e-15 | 160 |
presumptive endoderm | 7.50e-15 | 160 |
digestive system | 2.64e-10 | 145 |
digestive tract | 2.64e-10 | 145 |
primitive gut | 2.64e-10 | 145 |
respiratory system | 3.77e-10 | 74 |
extraembryonic membrane | 1.09e-09 | 14 |
membranous layer | 1.09e-09 | 14 |
organ component layer | 4.65e-09 | 66 |
trunk | 2.05e-08 | 199 |
subdivision of digestive tract | 3.48e-08 | 118 |
foregut | 3.79e-08 | 87 |
head | 7.25e-08 | 56 |
respiratory tract | 8.00e-08 | 54 |
subdivision of trunk | 8.37e-08 | 112 |
extraembryonic structure | 1.65e-07 | 24 |
primordium | 2.06e-07 | 160 |
subdivision of head | 3.15e-07 | 49 |
orifice | 4.48e-07 | 36 |
anterior region of body | 4.76e-07 | 62 |
craniocervical region | 4.76e-07 | 62 |
segment of respiratory tract | 5.29e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.55e-08 | 106 |
squamous cell carcinoma | 2.19e-07 | 14 |