FFCP PHASE1:Hg19::chr1:201299393..201299421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5317 | |EntrezGene=5317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9023 | |HGNC=9023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-102bp_to_AK123555_5end | |association_with_transcript=-102bp_to_AK123555_5end | ||
|cluster_id=chr1:201299393..201299421,+ | |||
|description=CAGE_peak_3_at_PKP1_5end | |description=CAGE_peak_3_at_PKP1_5end | ||
|id=chr1:201299393..201299421,+ | |id=chr1:201299393..201299421,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.66e-18!13;CL:0002076!2.02e-16!43;CL:0000622!6.18e-14!5;CL:0000154!1.56e-11!6;CL:0000066!2.53e-11!254;CL:0000223!1.24e-10!59;CL:0002623!7.18e-09!3;CL:0002077!1.09e-08!33;CL:0002251!1.51e-08!21;CL:0002368!2.80e-08!13;CL:0000362!3.61e-08!8;CL:0002166!5.21e-08!3;CL:0000150!1.60e-07!9;CL:0000240!6.23e-07!6;CL:0000311!6.23e-07!6;CL:0000079!6.23e-07!6;CL:0000237!6.23e-07!6;CL:0000036!6.23e-07!6;CL:0000357!6.23e-07!6;CL:0000114!6.23e-07!6;CL:0000575!8.26e-07!2;CL:0000244!9.28e-07!4;CL:0000731!9.28e-07!4;CL:0000317!9.73e-07!2;CL:1000448!9.73e-07!2;CL:0002308!9.73e-07!2;CL:0002140!9.73e-07!2 | |ontology_enrichment_celltype=CL:0002159!1.66e-18!13;CL:0002076!2.02e-16!43;CL:0000622!6.18e-14!5;CL:0000154!1.56e-11!6;CL:0000066!2.53e-11!254;CL:0000223!1.24e-10!59;CL:0002623!7.18e-09!3;CL:0002077!1.09e-08!33;CL:0002251!1.51e-08!21;CL:0002368!2.80e-08!13;CL:0000362!3.61e-08!8;CL:0002166!5.21e-08!3;CL:0000150!1.60e-07!9;CL:0000240!6.23e-07!6;CL:0000311!6.23e-07!6;CL:0000079!6.23e-07!6;CL:0000237!6.23e-07!6;CL:0000036!6.23e-07!6;CL:0000357!6.23e-07!6;CL:0000114!6.23e-07!6;CL:0000575!8.26e-07!2;CL:0000244!9.28e-07!4;CL:0000731!9.28e-07!4;CL:0000317!9.73e-07!2;CL:1000448!9.73e-07!2;CL:0002308!9.73e-07!2;CL:0002140!9.73e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.89e-26;5!CL:0000154;5.08e-22;6!CL:0002623;2.46e-16;3!CL:0000150;1.28e-14;9!CL:0002159;1.94e-13;14!CL:0000575;3.85e-12;2!CL:0000317;6.84e-12;2!CL:1000448;6.84e-12;2!CL:0002308;6.84e-12;2!CL:0002140;6.84e-12;2!CL:0000362;9.88e-10;9!CL:0002251;6.79e-09;20!CL:0002231;5.24e-08;3!CL:0002621;5.24e-08;3!CL:0002076;9.53e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.24e-26,5;CL:0000154,3.59e-22,6;CL:0002623,2.34e-16,3;CL:0000150,1.02e-14,9;CL:0002159,1.76e-13,14;CL:0000575,3.37e-12,2;CL:0000317,4.68e-12,2;CL:1000448,4.68e-12,2;CL:0002308,4.68e-12,2;CL:0002140,4.68e-12,2;CL:0000362,9.46e-10,9;CL:0002251,5.95e-09,20;CL:0002076,1.23e-08,42;CL:0002231,4.89e-08,3;CL:0002621,5.25e-08,3;CL:0002077,7.17e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.48e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!1.52e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!2.14e-11!35;UBERON:0000166!9.49e-11!21;UBERON:0003102!1.68e-09!95;UBERON:0000305!2.57e-09!7;UBERON:0000165!4.12e-09!28;UBERON:0000930!4.12e-09!28;UBERON:0001004!9.55e-09!72;UBERON:0004871!4.28e-08!8;UBERON:0002419!9.73e-07!2;UBERON:0007771!9.73e-07!2;UBERON:0003297!9.73e-07!2;UBERON:0001821!9.73e-07!2;UBERON:0003487!9.73e-07!2;UBERON:0001820!9.73e-07!2;UBERON:0005089!9.73e-07!2;UBERON:0005088!9.73e-07!2;UBERON:0000924!9.87e-07!173;UBERON:0006601!9.87e-07!173 | |ontology_enrichment_uberon=UBERON:0000161!2.14e-11!35;UBERON:0000166!9.49e-11!21;UBERON:0003102!1.68e-09!95;UBERON:0000305!2.57e-09!7;UBERON:0000165!4.12e-09!28;UBERON:0000930!4.12e-09!28;UBERON:0001004!9.55e-09!72;UBERON:0004871!4.28e-08!8;UBERON:0002419!9.73e-07!2;UBERON:0007771!9.73e-07!2;UBERON:0003297!9.73e-07!2;UBERON:0001821!9.73e-07!2;UBERON:0003487!9.73e-07!2;UBERON:0001820!9.73e-07!2;UBERON:0005089!9.73e-07!2;UBERON:0005088!9.73e-07!2;UBERON:0000924!9.87e-07!173;UBERON:0006601!9.87e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;6.84e-12;2!UBERON:0007771;6.84e-12;2!UBERON:0003297;6.84e-12;2!UBERON:0001821;6.84e-12;2!UBERON:0003487;6.84e-12;2!UBERON:0001820;6.84e-12;2!UBERON:0002050;4.00e-10;5!UBERON:0005423;4.00e-10;5!UBERON:0001041;4.25e-09;14!UBERON:0000165;1.64e-08;28!UBERON:0001723;1.66e-08;3!UBERON:0001033;1.66e-08;3!UBERON:0001044;2.04e-08;6!UBERON:0003293;2.04e-08;6!UBERON:0003294;2.04e-08;6!UBERON:0010047;2.04e-08;6!UBERON:0003408;2.04e-08;6!UBERON:0000167;2.04e-08;6!UBERON:0001949;5.24e-08;3!UBERON:0001043;8.87e-08;3!UBERON:0000486;2.78e-07;12!UBERON:0000989;8.48e-07;1!UBERON:0008811;8.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,6.66e-13,36;UBERON:0002419,4.68e-12,2;UBERON:0007771,4.68e-12,2;UBERON:0003297,4.68e-12,2;UBERON:0001821,4.68e-12,2;UBERON:0003487,4.68e-12,2;UBERON:0001820,4.68e-12,2;UBERON:0005089,4.68e-12,2;UBERON:0005088,4.68e-12,2;UBERON:0003102,7.83e-12,99;UBERON:0000166,4.42e-11,22;UBERON:0001723,1.72e-08,3;UBERON:0001033,1.72e-08,3;UBERON:0010056,1.72e-08,3;UBERON:0001044,1.99e-08,6;UBERON:0003293,1.99e-08,6;UBERON:0003294,1.99e-08,6;UBERON:0010047,1.99e-08,6;UBERON:0000167,1.99e-08,6;UBERON:0000165,3.47e-08,29;UBERON:0000930,3.47e-08,29;UBERON:0001949,5.25e-08,3;UBERON:0001043,6.72e-08,3;UBERON:0009143,6.72e-08,3;UBERON:0001444,2.04e-07,49;UBERON:0004121,5.37e-07,171;UBERON:0000924,5.37e-07,171;UBERON:0006601,5.37e-07,171;UBERON:0000989,7.19e-07,1;UBERON:0008811,7.19e-07,1;UBERON:0006258,7.19e-07,1;UBERON:0005876,7.19e-07,1;UBERON:0004874,7.19e-07,1 | |||
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| ||
|short_description=p3@PKP1 | |short_description=p3@PKP1 | ||
}} | }} |
Latest revision as of 17:17, 19 September 2015
Short description: | p3@PKP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PKP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -102bp_to_AK123555_5end |
EntrezGene: | PKP1 |
HGNC: | 9023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.24e-26 | 5 |
protein secreting cell | 3.59e-22 | 6 |
acinar cell of salivary gland | 2.34e-16 | 3 |
glandular epithelial cell | 1.02e-14 | 9 |
general ecto-epithelial cell | 1.76e-13 | 14 |
corneal epithelial cell | 3.37e-12 | 2 |
sebum secreting cell | 4.68e-12 | 2 |
epithelial cell of sweat gland | 4.68e-12 | 2 |
epithelial cell of skin gland | 4.68e-12 | 2 |
acinar cell of sebaceous gland | 4.68e-12 | 2 |
epidermal cell | 9.46e-10 | 9 |
epithelial cell of alimentary canal | 5.95e-09 | 20 |
endo-epithelial cell | 1.23e-08 | 42 |
epithelial cell of prostate | 4.89e-08 | 3 |
gingival epithelial cell | 5.25e-08 | 3 |
ecto-epithelial cell | 7.17e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
orifice | 6.66e-13 | 36 |
skin gland | 4.68e-12 | 2 |
epidermis gland | 4.68e-12 | 2 |
gland of integumental system | 4.68e-12 | 2 |
sebaceous gland | 4.68e-12 | 2 |
skin sebaceous gland | 4.68e-12 | 2 |
sweat gland | 4.68e-12 | 2 |
sweat gland placode | 4.68e-12 | 2 |
sebaceous gland placode | 4.68e-12 | 2 |
surface structure | 7.83e-12 | 99 |
oral opening | 4.42e-11 | 22 |
tongue | 1.72e-08 | 3 |
gustatory system | 1.72e-08 | 3 |
future tongue | 1.72e-08 | 3 |
saliva-secreting gland | 1.99e-08 | 6 |
gland of oral region | 1.99e-08 | 6 |
gland of foregut | 1.99e-08 | 6 |
oral gland | 1.99e-08 | 6 |
oral cavity | 1.99e-08 | 6 |
mouth | 3.47e-08 | 29 |
stomodeum | 3.47e-08 | 29 |
gingival epithelium | 5.25e-08 | 3 |
esophagus | 6.72e-08 | 3 |
esophageal region | 6.72e-08 | 3 |
subdivision of head | 2.04e-07 | 49 |
ectoderm-derived structure | 5.37e-07 | 171 |
ectoderm | 5.37e-07 | 171 |
presumptive ectoderm | 5.37e-07 | 171 |
penis | 7.19e-07 | 1 |
intromittent organ | 7.19e-07 | 1 |
lateral plate mesenchyme | 7.19e-07 | 1 |
undifferentiated genital tubercle | 7.19e-07 | 1 |
somatopleure | 7.19e-07 | 1 |