FFCP PHASE1:Hg19::chr19:52956798..52956843,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:52956798..52956843,+
|short_description=p1@ZNF578
|description=CAGE_peak_1_at_ZNF578_5end
|association_with_transcript=0bp_to_ENST00000480028,ENST00000553...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147660 | |EntrezGene=147660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26449 | |HGNC=26449 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4F6,Q3MI94,Q96N58 | |UniProt=G3V4F6,Q3MI94,Q96N58 | ||
|association_with_transcript=0bp_to_ENST00000480028,ENST00000553364,NM_001099694,uc002pzm.2,uc002pzn.2,uc002pzp.3_5end | |||
|cluster_id=chr19:52956798..52956843,+ | |||
|description=CAGE_peak_1_at_ZNF578_5end | |||
|id=chr19:52956798..52956843,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.71e-12!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!4.10e-10!173;UBERON:0006601!4.10e-10!173;UBERON:0004121!6.69e-10!169;UBERON:0000073!1.29e-09!94;UBERON:0001016!1.29e-09!94;UBERON:0005743!6.29e-09!86;UBERON:0001017!1.71e-08!82;UBERON:0002346!5.33e-08!90;UBERON:0003075!7.75e-08!86;UBERON:0007284!7.75e-08!86;UBERON:0000033!3.01e-07!123;UBERON:0000914!3.12e-07!83;UBERON:0002329!3.12e-07!83;UBERON:0003077!3.12e-07!83;UBERON:0003059!3.12e-07!83;UBERON:0007282!3.12e-07!83;UBERON:0009618!3.12e-07!83;UBERON:0007285!3.12e-07!83;UBERON:0000153!3.55e-07!129;UBERON:0007811!3.55e-07!129;UBERON:0002616!5.06e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.27e-09,171;UBERON:0000924,6.27e-09,171;UBERON:0006601,6.27e-09,171;UBERON:0010314,2.84e-08,132;UBERON:0001016,8.36e-08,89;UBERON:0001017,8.54e-08,81;UBERON:0002346,6.87e-07,86;UBERON:0003075,7.53e-07,82;UBERON:0007284,7.53e-07,82 | |||
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| ||
|short_description=p1@ZNF578 | |||
}} | }} |
Latest revision as of 17:35, 19 September 2015
Short description: | p1@ZNF578 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF578_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000480028, ENST00000553364, NM_001099694, uc002pzm.2, uc002pzn.2, uc002pzp.3_5end |
EntrezGene: | ZNF578 |
HGNC: | 26449 |
UniProt: | G3V4F6Q3MI94Q96N58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.27e-09 | 171 |
ectoderm | 6.27e-09 | 171 |
presumptive ectoderm | 6.27e-09 | 171 |
structure with developmental contribution from neural crest | 2.84e-08 | 132 |
nervous system | 8.36e-08 | 89 |
central nervous system | 8.54e-08 | 81 |
neurectoderm | 6.87e-07 | 86 |
neural plate | 7.53e-07 | 82 |
presumptive neural plate | 7.53e-07 | 82 |