FFCP PHASE1:Hg19::chr11:67141640..67141651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23529 | |EntrezGene=23529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17412 | |HGNC=17412 | ||
|TSSclassifier=strong | |||
|UniProt=B4DNT4,Q9UBD9 | |UniProt=B4DNT4,Q9UBD9 | ||
|association_with_transcript=0bp_to_ENST00000533438,NM_001166212,uc010rpp.1_5end | |association_with_transcript=0bp_to_ENST00000533438,NM_001166212,uc010rpp.1_5end | ||
|cluster_id=chr11:67141640..67141651,- | |||
|description=CAGE_peak_2_at_CLCF1_5end | |description=CAGE_peak_2_at_CLCF1_5end | ||
|id=chr11:67141640..67141651,- | |id=chr11:67141640..67141651,- | ||
|ontology_enrichment_celltype=CL:0000066!4.81e-22!254;CL:0002321!1.26e-15!248;CL:0000220!2.93e-15!246;CL:0000222!2.02e-11!119;CL:0002139!1.88e-10!24;CL:0000213!2.24e-10!57;CL:0000215!2.24e-10!57;CL:0002078!8.23e-10!44;CL:0000115!8.32e-10!35;CL:0000076!8.02e-09!62;CL:0002620!1.31e-08!23;CL:0000071!1.07e-07!18;CL:0002546!1.07e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.81e-22!254;CL:0002321!1.26e-15!248;CL:0000220!2.93e-15!246;CL:0000222!2.02e-11!119;CL:0002139!1.88e-10!24;CL:0000213!2.24e-10!57;CL:0000215!2.24e-10!57;CL:0002078!8.23e-10!44;CL:0000115!8.32e-10!35;CL:0000076!8.02e-09!62;CL:0002620!1.31e-08!23;CL:0000071!1.07e-07!18;CL:0002546!1.07e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-15;24!CL:0000115;2.76e-12;36!CL:1000507;3.85e-11;10!CL:1000494;3.85e-11;10!CL:1000449;9.38e-10;15!CL:0000071;1.79e-09;18!CL:0002078;9.31e-09;45!CL:1000497;1.79e-08;17!CL:0002518;1.79e-08;17!CL:0002543;3.90e-08;6!CL:0002138;3.90e-08;6!CL:0000213;6.85e-08;58!CL:0000215;6.85e-08;58!CL:0000159;2.43e-07;2 | |ontology_enrichment_celltype_v019=CL:0002139;2.18e-15;24!CL:0000115;2.76e-12;36!CL:1000507;3.85e-11;10!CL:1000494;3.85e-11;10!CL:1000449;9.38e-10;15!CL:0000071;1.79e-09;18!CL:0002078;9.31e-09;45!CL:1000497;1.79e-08;17!CL:0002518;1.79e-08;17!CL:0002543;3.90e-08;6!CL:0002138;3.90e-08;6!CL:0000213;6.85e-08;58!CL:0000215;6.85e-08;58!CL:0000159;2.43e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.27e-15,24;CL:0000115,1.41e-15,36;CL:0000066,1.06e-14,253;CL:0002078,1.84e-13,45;CL:0000213,1.36e-12,58;CL:0000215,1.36e-12,58;CL:1000507,3.39e-11,10;CL:1000494,3.39e-11,10;CL:0000222,3.89e-10,121;CL:1000449,8.54e-10,15;CL:0000071,1.13e-09,18;CL:0002546,1.13e-09,18;CL:0002321,1.21e-08,250;CL:1000497,1.65e-08,17;CL:0002518,1.65e-08,17;CL:0005020,3.80e-08,6;CL:0002138,3.80e-08,6;CL:0005022,3.80e-08,6;CL:0002543,5.37e-08,6;CL:0000159,1.71e-07,2;CL:0000076,2.15e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-09;18!CL:0005022;3.90e-08;6 | |ontology_enrichment_development_v019=CL:0002546;1.79e-09;18!CL:0005022;3.90e-08;6 | ||
|ontology_enrichment_disease=DOID:305!2.67e-10!106;DOID:0050687!1.53e-07!143 | |ontology_enrichment_disease=DOID:305!2.67e-10!106;DOID:0050687!1.53e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.14e-13!118;UBERON:0000055!2.36e-11!69;UBERON:0000468!1.18e-10!659;UBERON:0001981!2.44e-10!60;UBERON:0007500!2.44e-10!60;UBERON:0004537!2.44e-10!60;UBERON:0006965!2.44e-10!60;UBERON:0002049!2.64e-10!79;UBERON:0007798!2.64e-10!79;UBERON:0000467!2.02e-09!625;UBERON:0000480!2.82e-09!626;UBERON:0000119!4.30e-09!312;UBERON:0000483!5.95e-09!309;UBERON:0000481!1.80e-08!347;UBERON:0004872!1.88e-08!84;UBERON:0000477!1.92e-08!286;UBERON:0004111!2.15e-08!241;UBERON:0000490!3.27e-08!138;UBERON:0003104!4.14e-08!238;UBERON:0009142!4.14e-08!238;UBERON:0000487!4.58e-08!22;UBERON:0001986!1.07e-07!18;UBERON:0004638!1.07e-07!18;UBERON:0004852!1.07e-07!18;UBERON:0000475!1.09e-07!365;UBERON:0006914!1.43e-07!25;UBERON:0001637!2.36e-07!42;UBERON:0003509!2.36e-07!42;UBERON:0004572!2.36e-07!42;UBERON:0004573!3.18e-07!33;UBERON:0004571!3.18e-07!33 | |ontology_enrichment_uberon=UBERON:0003914!9.14e-13!118;UBERON:0000055!2.36e-11!69;UBERON:0000468!1.18e-10!659;UBERON:0001981!2.44e-10!60;UBERON:0007500!2.44e-10!60;UBERON:0004537!2.44e-10!60;UBERON:0006965!2.44e-10!60;UBERON:0002049!2.64e-10!79;UBERON:0007798!2.64e-10!79;UBERON:0000467!2.02e-09!625;UBERON:0000480!2.82e-09!626;UBERON:0000119!4.30e-09!312;UBERON:0000483!5.95e-09!309;UBERON:0000481!1.80e-08!347;UBERON:0004872!1.88e-08!84;UBERON:0000477!1.92e-08!286;UBERON:0004111!2.15e-08!241;UBERON:0000490!3.27e-08!138;UBERON:0003104!4.14e-08!238;UBERON:0009142!4.14e-08!238;UBERON:0000487!4.58e-08!22;UBERON:0001986!1.07e-07!18;UBERON:0004638!1.07e-07!18;UBERON:0004852!1.07e-07!18;UBERON:0000475!1.09e-07!365;UBERON:0006914!1.43e-07!25;UBERON:0001637!2.36e-07!42;UBERON:0003509!2.36e-07!42;UBERON:0004572!2.36e-07!42;UBERON:0004573!3.18e-07!33;UBERON:0004571!3.18e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.85e-11;10!UBERON:0009773;3.85e-11;10!UBERON:0001231;3.85e-11;10!UBERON:0004810;3.85e-11;10!UBERON:0006555;9.38e-10;15!UBERON:0004819;9.38e-10;15!UBERON:0001285;9.38e-10;15!UBERON:0007684;9.38e-10;15!UBERON:0004638;1.79e-09;18!UBERON:0001986;1.79e-09;18!UBERON:0004852;1.79e-09;18!UBERON:0002113;3.79e-09;24!UBERON:0011143;3.79e-09;24!UBERON:0000489;5.92e-09;29!UBERON:0006554;1.38e-08;30!UBERON:0001008;1.38e-08;30!UBERON:0000487;1.65e-07;22!UBERON:0003914;2.24e-07;74!UBERON:0000353;2.29e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;3.85e-11;10!UBERON:0009773;3.85e-11;10!UBERON:0001231;3.85e-11;10!UBERON:0004810;3.85e-11;10!UBERON:0006555;9.38e-10;15!UBERON:0004819;9.38e-10;15!UBERON:0001285;9.38e-10;15!UBERON:0007684;9.38e-10;15!UBERON:0004638;1.79e-09;18!UBERON:0001986;1.79e-09;18!UBERON:0004852;1.79e-09;18!UBERON:0002113;3.79e-09;24!UBERON:0011143;3.79e-09;24!UBERON:0000489;5.92e-09;29!UBERON:0006554;1.38e-08;30!UBERON:0001008;1.38e-08;30!UBERON:0000487;1.65e-07;22!UBERON:0003914;2.24e-07;74!UBERON:0000353;2.29e-07;15 | ||
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| ||
|short_description=p2@CLCF1 | |short_description=p2@CLCF1 | ||
}} | }} |
Latest revision as of 17:43, 19 September 2015
Short description: | p2@CLCF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533438, NM_001166212, uc010rpp.1_5end |
EntrezGene: | CLCF1 |
HGNC: | 17412 |
UniProt: | B4DNT4Q9UBD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.27e-15 | 24 |
endothelial cell | 1.41e-15 | 36 |
epithelial cell | 1.06e-14 | 253 |
meso-epithelial cell | 1.84e-13 | 45 |
lining cell | 1.36e-12 | 58 |
barrier cell | 1.36e-12 | 58 |
kidney tubule cell | 3.39e-11 | 10 |
nephron tubule epithelial cell | 3.39e-11 | 10 |
mesodermal cell | 3.89e-10 | 121 |
epithelial cell of nephron | 8.54e-10 | 15 |
blood vessel endothelial cell | 1.13e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.13e-09 | 18 |
embryonic cell | 1.21e-08 | 250 |
kidney cell | 1.65e-08 | 17 |
kidney epithelial cell | 1.65e-08 | 17 |
lymphangioblast | 3.80e-08 | 6 |
endothelial cell of lymphatic vessel | 3.80e-08 | 6 |
vascular lymphangioblast | 3.80e-08 | 6 |
vein endothelial cell | 5.37e-08 | 6 |
seromucus secreting cell | 1.71e-07 | 2 |
squamous epithelial cell | 2.15e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.39e-11 | 10 |
vessel | 6.51e-10 | 68 |
nephron epithelium | 8.54e-10 | 15 |
renal tubule | 8.54e-10 | 15 |
nephron tubule | 8.54e-10 | 15 |
nephron | 8.54e-10 | 15 |
uriniferous tubule | 8.54e-10 | 15 |
nephrogenic mesenchyme | 8.54e-10 | 15 |
blood vessel endothelium | 1.13e-09 | 18 |
endothelium | 1.13e-09 | 18 |
cardiovascular system endothelium | 1.13e-09 | 18 |
vasculature | 3.69e-09 | 78 |
vascular system | 3.69e-09 | 78 |
excretory tube | 4.12e-09 | 16 |
kidney epithelium | 4.12e-09 | 16 |
epithelial tube | 4.26e-09 | 117 |
kidney | 3.04e-08 | 26 |
kidney mesenchyme | 3.04e-08 | 26 |
upper urinary tract | 3.04e-08 | 26 |
kidney rudiment | 3.04e-08 | 26 |
kidney field | 3.04e-08 | 26 |
cavitated compound organ | 4.08e-08 | 31 |
simple squamous epithelium | 1.15e-07 | 22 |
parenchyma | 2.60e-07 | 15 |
epithelial tube open at both ends | 7.03e-07 | 59 |
blood vessel | 7.03e-07 | 59 |
blood vasculature | 7.03e-07 | 59 |
vascular cord | 7.03e-07 | 59 |