FFCP PHASE1:Hg19::chr10:89577654..89577665,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84896 | |EntrezGene=84896 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25903 | |HGNC=25903 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBU5 | |UniProt=Q8NBU5 | ||
|association_with_transcript=251bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end | |association_with_transcript=251bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end | ||
|cluster_id=chr10:89577654..89577665,- | |||
|coexpression_cluster_id=C170 | |||
|description=CAGE_peak_6_at_ATAD1_5end | |description=CAGE_peak_6_at_ATAD1_5end | ||
|id=chr10:89577654..89577665,- | |id=chr10:89577654..89577665,- | ||
|ontology_enrichment_celltype=CL:0002150!1.40e-08!3;CL:0000861!1.40e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.40e-08!3;CL:0000861!1.40e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002591;8.72e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.03e-17,1;CL:0000066,5.15e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.50e-27;29 | |||
|ontology_enrichment_disease=DOID:305!7.60e-14!106;DOID:0050687!7.75e-14!143;DOID:162!5.43e-10!235;DOID:14566!1.56e-09!239;DOID:4362!4.63e-07!5 | |ontology_enrichment_disease=DOID:305!7.60e-14!106;DOID:0050687!7.75e-14!143;DOID:162!5.43e-10!235;DOID:14566!1.56e-09!239;DOID:4362!4.63e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.84e-15,106;DOID:0050687,8.80e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.32e-21!9;UBERON:0001557!5.32e-16!19;UBERON:0000072!1.19e-11!46;UBERON:0008947!1.23e-11!38;UBERON:0003258!1.23e-11!38;UBERON:0000065!1.08e-10!53;UBERON:0001004!1.74e-09!72;UBERON:0001041!8.21e-07!98 | |ontology_enrichment_uberon=UBERON:0001737!1.32e-21!9;UBERON:0001557!5.32e-16!19;UBERON:0000072!1.19e-11!46;UBERON:0008947!1.23e-11!38;UBERON:0003258!1.23e-11!38;UBERON:0000065!1.08e-10!53;UBERON:0001004!1.74e-09!72;UBERON:0001041!8.21e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.62e-88;9!UBERON:0001557;2.62e-88;9!UBERON:0000072;4.33e-20;37!UBERON:0000065;4.98e-18;44!UBERON:0001004;2.74e-10;65!UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.41e-88,9;UBERON:0001557,2.27e-54,19;UBERON:0000072,9.02e-22,47;UBERON:0008947,9.02e-21,38;UBERON:0003258,9.02e-21,38;UBERON:0000065,6.85e-19,54;UBERON:0001004,1.19e-13,74;UBERON:0001041,1.58e-11,87;UBERON:0000078,1.57e-09,2;UBERON:0007497,1.57e-09,2;UBERON:0003643,1.57e-09,2;UBERON:0003504,1.57e-09,2;UBERON:0003469,1.57e-09,2;UBERON:0003496,1.57e-09,2;UBERON:0002012,1.57e-09,2;UBERON:0008886,1.57e-09,2;UBERON:0007303,1.57e-09,2;UBERON:0002061,1.57e-09,2;UBERON:0005432,1.57e-09,2;UBERON:0004363,1.57e-09,2;UBERON:0004921,2.91e-08,118;UBERON:0004145,9.12e-07,3 | |||
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| ||
|short_description=p6@ATAD1 | |short_description=p6@ATAD1 | ||
}} | }} |
Latest revision as of 18:52, 19 September 2015
Short description: | p6@ATAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATAD1_5end |
Coexpression cluster: | C170_epitheloid_cervical_Hep2_keratoacanthoma_adult_neuroblastoma_signet |
Association with transcript: | 251bp_to_ENST00000308448, ENST00000541004, NM_032810, uc001kez.1_5end |
EntrezGene: | ATAD1 |
HGNC: | 25903 |
UniProt: | Q8NBU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.03e-17 | 1 |
epithelial cell | 5.15e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.41e-88 | 9 |
upper respiratory tract | 2.27e-54 | 19 |
segment of respiratory tract | 9.02e-22 | 47 |
respiratory primordium | 9.02e-21 | 38 |
endoderm of foregut | 9.02e-21 | 38 |
respiratory tract | 6.85e-19 | 54 |
respiratory system | 1.19e-13 | 74 |
foregut | 1.58e-11 | 87 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.57e-09 | 2 |
developing epithelial placode | 1.57e-09 | 2 |
respiratory system arterial blood vessel | 1.57e-09 | 2 |
respiratory system blood vessel | 1.57e-09 | 2 |
respiratory system artery | 1.57e-09 | 2 |
head blood vessel | 1.57e-09 | 2 |
pulmonary artery | 1.57e-09 | 2 |
pulmonary vascular system | 1.57e-09 | 2 |
pharyngeal vasculature | 1.57e-09 | 2 |
truncus arteriosus | 1.57e-09 | 2 |
aortic sac | 1.57e-09 | 2 |
pharyngeal arch artery | 1.57e-09 | 2 |
subdivision of digestive tract | 2.91e-08 | 118 |
outflow tract | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.84e-15 | 106 |
cell type cancer | 8.80e-11 | 143 |