FFCP PHASE1:Hg19::chr22:31487193..31487207,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11126 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=246bp_to_uc011alg.1_5end | |||
|cluster_id=chr22:31487193..31487207,+ | |||
|coexpression_cluster_id=C727 | |||
|description=CAGE_peak_19_at_SMTN_5end | |||
|id=chr22:31487193..31487207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.17e-15;1!UBERON:0001045;1.84e-14;1!UBERON:0005754;1.84e-14;1!UBERON:0004874;1.84e-14;1!UBERON:0007297;7.03e-08;2!UBERON:0006603;2.35e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-08!115;UBERON:0006947!3.26e-08!3;UBERON:0004054!3.26e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;8.72e-24;9!UBERON:0000059;1.56e-19;11!UBERON:0006947;1.94e-18;3!UBERON:0004054;1.94e-18;3!UBERON:0006834;1.84e-14;1!UBERON:0001154;1.84e-14;1!UBERON:0001000;1.84e-14;1!UBERON:0000989;1.84e-14;1!UBERON:0000998;1.84e-14;1!UBERON:0001153;1.84e-14;1!UBERON:0008811;1.84e-14;1!UBERON:0006868;1.84e-14;1!UBERON:0009854;1.84e-14;1!UBERON:0005352;1.84e-14;1!UBERON:0005904;4.40e-14;4!UBERON:0000160;4.64e-12;17!UBERON:0003135;2.43e-11;11!UBERON:0004175;2.84e-10;21!UBERON:0003101;7.04e-10;22!UBERON:0000079;7.04e-10;22!UBERON:0004921;1.43e-09;33!UBERON:0005409;1.71e-09;22!UBERON:0001255;4.09e-08;2!UBERON:0001556;4.09e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.14e-23,9;UBERON:0000059,1.94e-19,11;UBERON:0006947,1.48e-18,3;UBERON:0004054,1.48e-18,3;UBERON:0007023,1.98e-15,114;UBERON:0001000,1.07e-14,1;UBERON:0005352,1.07e-14,1;UBERON:0000989,1.23e-14,1;UBERON:0008811,1.23e-14,1;UBERON:0006258,1.23e-14,1;UBERON:0005876,1.23e-14,1;UBERON:0004874,1.23e-14,1;UBERON:0006834,1.41e-14,1;UBERON:0001154,1.61e-14,1;UBERON:0001153,1.61e-14,1;UBERON:0001045,1.61e-14,1;UBERON:0000998,2.11e-14,1;UBERON:0006868,2.11e-14,1;UBERON:0005904,3.61e-14,4;UBERON:0000160,5.28e-12,17;UBERON:0003135,1.96e-11,11;UBERON:0003101,5.98e-10,22;UBERON:0000079,5.98e-10,22;UBERON:0004175,1.03e-08,25;UBERON:0005409,2.19e-08,25;UBERON:0001255,4.09e-08,2;UBERON:0001556,4.09e-08,2;UBERON:0003064,6.77e-08,28;UBERON:0005156,8.76e-08,59;UBERON:0000990,8.76e-08,59;UBERON:0001046,6.24e-07,19;UBERON:0003133,7.72e-07,48 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0.311039587661807,0,0,0,3.74844941420348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815439456455,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,7.96209544862804,1.14994833854341,1.22206028986725,0,0,0.104421949505455,0,0,0,0,0,0,1.97292201424695,1.20990716048664,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,2.03676934625681,0,0.451961481561065,0.274083849293502,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,2.98273752831953,0,0,0,0,0,0.643288897589907,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,1.27016115057279,0,0,0,0.223710863595585,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0.617393264863557,0.218559560503957,0,7.59959797437107,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,1.4668973301944,0,0.665756774185513,0,0 | |||
|short_description=p19@SMTN | |||
}} |
Latest revision as of 19:18, 19 September 2015
Short description: | p19@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SMTN_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | 246bp_to_uc011alg.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 1.14e-23 | 9 |
large intestine | 1.94e-19 | 11 |
male genital duct | 1.48e-18 | 3 |
internal male genitalia | 1.48e-18 | 3 |
adult organism | 1.98e-15 | 114 |
vas deferens | 1.07e-14 | 1 |
spermatic cord | 1.07e-14 | 1 |
penis | 1.23e-14 | 1 |
intromittent organ | 1.23e-14 | 1 |
lateral plate mesenchyme | 1.23e-14 | 1 |
undifferentiated genital tubercle | 1.23e-14 | 1 |
somatopleure | 1.23e-14 | 1 |
uterus or analog | 1.41e-14 | 1 |
vermiform appendix | 1.61e-14 | 1 |
caecum | 1.61e-14 | 1 |
midgut | 1.61e-14 | 1 |
seminal vesicle | 2.11e-14 | 1 |
seminal fluid secreting gland | 2.11e-14 | 1 |
duct of male reproductive system | 3.61e-14 | 4 |
intestine | 5.28e-12 | 17 |
male reproductive organ | 1.96e-11 | 11 |
male organism | 5.98e-10 | 22 |
male reproductive system | 5.98e-10 | 22 |
internal genitalia | 1.03e-08 | 25 |
gastrointestinal system | 2.19e-08 | 25 |
urinary bladder | 4.09e-08 | 2 |
lower urinary tract | 4.09e-08 | 2 |
intermediate mesoderm | 6.77e-08 | 28 |
reproductive structure | 8.76e-08 | 59 |
reproductive system | 8.76e-08 | 59 |
hindgut | 6.24e-07 | 19 |
reproductive organ | 7.72e-07 | 48 |