FFCP PHASE1:Hg19::chr19:54377174..54377207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=178bp_to_AK027693_5end | |association_with_transcript=178bp_to_AK027693_5end | ||
|cluster_id=chr19:54377174..54377207,+ | |||
|coexpression_cluster_id=C482 | |coexpression_cluster_id=C482 | ||
|description=CAGE_peak_10_at_MYADM_5end | |description=CAGE_peak_10_at_MYADM_5end | ||
|id=chr19:54377174..54377207,+ | |id=chr19:54377174..54377207,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.19e-13!42;CL:0000860!1.94e-11!45;CL:0000144!1.93e-10!625;CL:0000048!8.59e-10!430;CL:0000766!2.96e-09!76;CL:0000723!4.42e-09!436;CL:0002371!7.24e-09!591;CL:0000034!7.27e-09!444;CL:0000557!6.39e-08!71;CL:0000134!2.07e-07!358;CL:0002320!2.38e-07!365;CL:0000057!2.69e-07!75;CL:0000839!3.45e-07!70;CL:0000359!7.80e-07!32 | |ontology_enrichment_celltype=CL:0002057!1.19e-13!42;CL:0000860!1.94e-11!45;CL:0000144!1.93e-10!625;CL:0000048!8.59e-10!430;CL:0000766!2.96e-09!76;CL:0000723!4.42e-09!436;CL:0002371!7.24e-09!591;CL:0000034!7.27e-09!444;CL:0000557!6.39e-08!71;CL:0000134!2.07e-07!358;CL:0002320!2.38e-07!365;CL:0000057!2.69e-07!75;CL:0000839!3.45e-07!70;CL:0000359!7.80e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-20;33!CL:0002057;2.89e-20;33!CL:0000473;4.15e-14;39!CL:0000234;4.15e-14;39!CL:0000576;2.05e-08;48!CL:0000766;3.36e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.28e-17,42;CL:0002057,7.28e-17,42;CL:0000473,3.58e-14,48;CL:0000234,3.58e-14,48;CL:0000766,1.71e-13,72;CL:0000048,3.47e-12,427;CL:0000557,5.55e-12,67;CL:0000723,1.13e-11,433;CL:0000034,3.32e-11,441;CL:0000839,5.79e-11,66;CL:0000134,1.70e-10,354;CL:0002320,4.23e-10,361;CL:0002009,1.13e-09,61;CL:0002194,4.23e-09,59;CL:0000576,4.23e-09,59;CL:0000040,4.23e-09,59;CL:0000559,4.23e-09,59;CL:0000219,5.22e-08,386;CL:0000057,3.79e-07,76;CL:0000359,4.44e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.31e-15!216;UBERON:0000926!5.52e-13!448;UBERON:0004120!5.52e-13!448;UBERON:0006603!5.52e-13!448;UBERON:0001981!5.19e-09!60;UBERON:0007500!5.19e-09!60;UBERON:0004537!5.19e-09!60;UBERON:0006965!5.19e-09!60;UBERON:0002204!7.79e-09!167;UBERON:0001637!1.37e-08!42;UBERON:0003509!1.37e-08!42;UBERON:0004572!1.37e-08!42;UBERON:0004872!4.01e-08!84;UBERON:0003914!5.86e-08!118;UBERON:0000055!8.97e-08!69;UBERON:0004573!1.91e-07!33;UBERON:0004571!1.91e-07!33;UBERON:0004535!2.10e-07!110;UBERON:0001009!4.91e-07!113;UBERON:0002049!6.74e-07!79;UBERON:0007798!6.74e-07!79;UBERON:0002384!8.54e-07!375;UBERON:0005256!9.38e-07!143 | |ontology_enrichment_uberon=UBERON:0003081!2.31e-15!216;UBERON:0000926!5.52e-13!448;UBERON:0004120!5.52e-13!448;UBERON:0006603!5.52e-13!448;UBERON:0001981!5.19e-09!60;UBERON:0007500!5.19e-09!60;UBERON:0004537!5.19e-09!60;UBERON:0006965!5.19e-09!60;UBERON:0002204!7.79e-09!167;UBERON:0001637!1.37e-08!42;UBERON:0003509!1.37e-08!42;UBERON:0004572!1.37e-08!42;UBERON:0004872!4.01e-08!84;UBERON:0003914!5.86e-08!118;UBERON:0000055!8.97e-08!69;UBERON:0004573!1.91e-07!33;UBERON:0004571!1.91e-07!33;UBERON:0004535!2.10e-07!110;UBERON:0001009!4.91e-07!113;UBERON:0002049!6.74e-07!79;UBERON:0007798!6.74e-07!79;UBERON:0002384!8.54e-07!375;UBERON:0005256!9.38e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.29e-07;33!UBERON:0004571;2.29e-07;33!UBERON:0001637;4.27e-07;42!UBERON:0003509;4.27e-07;42!UBERON:0004572;4.27e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.51e-21,315;UBERON:0004120,2.51e-21,315;UBERON:0006603,2.51e-21,315;UBERON:0003081,6.23e-18,203;UBERON:0002384,1.62e-09,371;UBERON:0001637,1.72e-09,42;UBERON:0003509,1.72e-09,42;UBERON:0004572,1.72e-09,42;UBERON:0002371,3.19e-09,76;UBERON:0002204,5.13e-09,167;UBERON:0007500,1.16e-08,59;UBERON:0001981,1.16e-08,59;UBERON:0004537,1.16e-08,59;UBERON:0006965,1.16e-08,59;UBERON:0002390,3.05e-08,98;UBERON:0003061,3.05e-08,98;UBERON:0004573,4.12e-08,33;UBERON:0004571,4.12e-08,33;UBERON:0001474,4.54e-08,82;UBERON:0000055,1.52e-07,68;UBERON:0003914,1.57e-07,117;UBERON:0002193,2.50e-07,108;UBERON:0004872,7.30e-07,83 | |||
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| ||
|short_description=p10@MYADM | |short_description=p10@MYADM | ||
}} | }} |
Latest revision as of 20:13, 19 September 2015
Short description: | p10@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | 178bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.28e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-17 | 42 |
defensive cell | 3.58e-14 | 48 |
phagocyte | 3.58e-14 | 48 |
myeloid leukocyte | 1.71e-13 | 72 |
multi fate stem cell | 3.47e-12 | 427 |
granulocyte monocyte progenitor cell | 5.55e-12 | 67 |
somatic stem cell | 1.13e-11 | 433 |
stem cell | 3.32e-11 | 441 |
myeloid lineage restricted progenitor cell | 5.79e-11 | 66 |
mesenchymal cell | 1.70e-10 | 354 |
connective tissue cell | 4.23e-10 | 361 |
macrophage dendritic cell progenitor | 1.13e-09 | 61 |
monopoietic cell | 4.23e-09 | 59 |
monocyte | 4.23e-09 | 59 |
monoblast | 4.23e-09 | 59 |
promonocyte | 4.23e-09 | 59 |
motile cell | 5.22e-08 | 386 |
fibroblast | 3.79e-07 | 76 |
vascular associated smooth muscle cell | 4.44e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.51e-21 | 315 |
mesoderm-derived structure | 2.51e-21 | 315 |
presumptive mesoderm | 2.51e-21 | 315 |
lateral plate mesoderm | 6.23e-18 | 203 |
connective tissue | 1.62e-09 | 371 |
artery | 1.72e-09 | 42 |
arterial blood vessel | 1.72e-09 | 42 |
arterial system | 1.72e-09 | 42 |
bone marrow | 3.19e-09 | 76 |
musculoskeletal system | 5.13e-09 | 167 |
epithelial tube open at both ends | 1.16e-08 | 59 |
blood vessel | 1.16e-08 | 59 |
blood vasculature | 1.16e-08 | 59 |
vascular cord | 1.16e-08 | 59 |
hematopoietic system | 3.05e-08 | 98 |
blood island | 3.05e-08 | 98 |
systemic artery | 4.12e-08 | 33 |
systemic arterial system | 4.12e-08 | 33 |
bone element | 4.54e-08 | 82 |
vessel | 1.52e-07 | 68 |
epithelial tube | 1.57e-07 | 117 |
hemolymphoid system | 2.50e-07 | 108 |
splanchnic layer of lateral plate mesoderm | 7.30e-07 | 83 |