FFCP PHASE1:Hg19::chr12:6484096..6484107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt=C5HTZ1,P37088 | |UniProt=C5HTZ1,P37088 | ||
|association_with_transcript=-127bp_to_ENST00000338748,ENST00000396966_5end | |association_with_transcript=-127bp_to_ENST00000338748,ENST00000396966_5end | ||
|cluster_id=chr12:6484096..6484107,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_20_at_SCNN1A_5end | |description=CAGE_peak_20_at_SCNN1A_5end | ||
|id=chr12:6484096..6484107,- | |id=chr12:6484096..6484107,- | ||
|ontology_enrichment_celltype=CL:0000066!3.64e-15!254;CL:0000223!5.94e-08!59 | |ontology_enrichment_celltype=CL:0000066!3.64e-15!254;CL:0000223!5.94e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.40e-10;6!CL:0002255;2.40e-10;6!CL:0000123;1.55e-08;2!CL:0000242;1.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.41e-10,6;CL:0002255,2.41e-10,6;CL:0000242,1.50e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.06e-15;1!UBERON:0007297;2.31e-08;2 | |||
|ontology_enrichment_disease=DOID:305!3.10e-21!106;DOID:0050687!2.25e-17!143;DOID:299!1.48e-09!25;DOID:0050615!4.44e-08!16;DOID:162!1.37e-07!235;DOID:14566!3.17e-07!239 | |ontology_enrichment_disease=DOID:305!3.10e-21!106;DOID:0050687!2.25e-17!143;DOID:299!1.48e-09!25;DOID:0050615!4.44e-08!16;DOID:162!1.37e-07!235;DOID:14566!3.17e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:299;3.20e-14;25!DOID:3001;2.40e-10;6!DOID:4929;1.39e-08;2!DOID:3910;2.31e-08;2!DOID:3493;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.34e-14,25;DOID:3001,2.41e-10,6;DOID:305,5.44e-10,106;DOID:0050687,6.92e-09,143;DOID:4929,1.39e-08,2;DOID:3493,2.48e-08,2;DOID:3910,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005153!3.90e-12!37;UBERON:0000466!6.17e-11!126;UBERON:0005177!1.39e-10!107;UBERON:0000464!5.69e-10!104;UBERON:0004119!4.51e-09!169;UBERON:0000925!4.51e-09!169;UBERON:0006595!4.51e-09!169;UBERON:0002048!1.18e-08!22;UBERON:0000117!1.18e-08!22;UBERON:0000171!1.18e-08!22;UBERON:0000170!1.18e-08!22;UBERON:0005597!1.18e-08!22;UBERON:0000118!1.18e-08!22;UBERON:0005911!1.24e-08!82;UBERON:0006947!2.08e-08!3;UBERON:0004054!2.08e-08!3;UBERON:0009569!6.43e-08!113;UBERON:0005157!9.94e-08!51;UBERON:0001007!1.03e-07!155;UBERON:0001555!1.03e-07!155;UBERON:0007026!1.03e-07!155;UBERON:0004921!1.33e-07!129;UBERON:0004185!1.33e-07!129;UBERON:0000058!1.54e-07!26;UBERON:0006554!3.02e-07!44;UBERON:0000077!3.87e-07!130;UBERON:0003135!4.65e-07!11;UBERON:0002113!5.06e-07!27;UBERON:0003918!5.06e-07!27;UBERON:0005095!5.06e-07!27;UBERON:0007687!5.06e-07!27;UBERON:0001008!5.15e-07!45;UBERON:0005156!6.52e-07!59;UBERON:0000990!6.52e-07!59;UBERON:0003101!9.76e-07!22;UBERON:0000079!9.76e-07!22 | |ontology_enrichment_uberon=UBERON:0005153!3.90e-12!37;UBERON:0000466!6.17e-11!126;UBERON:0005177!1.39e-10!107;UBERON:0000464!5.69e-10!104;UBERON:0004119!4.51e-09!169;UBERON:0000925!4.51e-09!169;UBERON:0006595!4.51e-09!169;UBERON:0002048!1.18e-08!22;UBERON:0000117!1.18e-08!22;UBERON:0000171!1.18e-08!22;UBERON:0000170!1.18e-08!22;UBERON:0005597!1.18e-08!22;UBERON:0000118!1.18e-08!22;UBERON:0005911!1.24e-08!82;UBERON:0006947!2.08e-08!3;UBERON:0004054!2.08e-08!3;UBERON:0009569!6.43e-08!113;UBERON:0005157!9.94e-08!51;UBERON:0001007!1.03e-07!155;UBERON:0001555!1.03e-07!155;UBERON:0007026!1.03e-07!155;UBERON:0004921!1.33e-07!129;UBERON:0004185!1.33e-07!129;UBERON:0000058!1.54e-07!26;UBERON:0006554!3.02e-07!44;UBERON:0000077!3.87e-07!130;UBERON:0003135!4.65e-07!11;UBERON:0002113!5.06e-07!27;UBERON:0003918!5.06e-07!27;UBERON:0005095!5.06e-07!27;UBERON:0007687!5.06e-07!27;UBERON:0001008!5.15e-07!45;UBERON:0005156!6.52e-07!59;UBERON:0000990!6.52e-07!59;UBERON:0003101!9.76e-07!22;UBERON:0000079!9.76e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.05e-19;3!UBERON:0004054;1.05e-19;3!UBERON:0001000;2.06e-15;1!UBERON:0000998;2.06e-15;1!UBERON:0006868;2.06e-15;1!UBERON:0005352;2.06e-15;1!UBERON:0005904;4.88e-15;4!UBERON:0000058;2.78e-13;10!UBERON:0004175;5.13e-11;21!UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.67e-20,3;UBERON:0004054,8.67e-20,3;UBERON:0000998,1.54e-15,1;UBERON:0006868,1.54e-15,1;UBERON:0001000,2.06e-15,1;UBERON:0005352,2.06e-15,1;UBERON:0005904,4.23e-15,4;UBERON:0004175,2.58e-09,25;UBERON:0004903,3.08e-08,2;UBERON:0002173,3.08e-08,2;UBERON:0002186,3.08e-08,2;UBERON:0000058,3.08e-07,19 | |||
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| ||
|short_description=p20@SCNN1A | |short_description=p20@SCNN1A | ||
}} | }} |
Latest revision as of 20:38, 19 September 2015
Short description: | p20@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SCNN1A_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -127bp_to_ENST00000338748, ENST00000396966_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | C5HTZ1P37088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.41e-10 | 6 |
stromal cell of endometrium | 2.41e-10 | 6 |
Merkel cell | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.67e-20 | 3 |
internal male genitalia | 8.67e-20 | 3 |
seminal vesicle | 1.54e-15 | 1 |
seminal fluid secreting gland | 1.54e-15 | 1 |
vas deferens | 2.06e-15 | 1 |
spermatic cord | 2.06e-15 | 1 |
duct of male reproductive system | 4.23e-15 | 4 |
internal genitalia | 2.58e-09 | 25 |
bronchoalveolar duct junction | 3.08e-08 | 2 |
alveolar duct | 3.08e-08 | 2 |
bronchiole | 3.08e-08 | 2 |
duct | 3.08e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.34e-14 | 25 |
female reproductive endometrioid cancer | 2.41e-10 | 6 |
carcinoma | 5.44e-10 | 106 |
cell type cancer | 6.92e-09 | 143 |
tubular adenocarcinoma | 1.39e-08 | 2 |
signet ring cell adenocarcinoma | 2.48e-08 | 2 |
lung adenocarcinoma | 3.08e-08 | 2 |