FFCP PHASE1:Hg19::chr1:935398..935465,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24149 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000481869_5end | |||
|cluster_id=chr1:935398..935465,- | |||
|description=CAGE_peak_2_at_HES4_5end | |||
|id=chr1:935398..935465,- | |||
|ontology_enrichment_celltype=CL:0000066!4.48e-33!254;CL:0002076!8.26e-09!43;CL:0000223!8.68e-09!59;CL:0002077!1.42e-07!33;CL:0000076!1.86e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.28e-07;42!CL:0002077;4.01e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.31e-33,253;CL:0002076,7.88e-10,42;CL:0000223,1.53e-09,58;CL:0002077,9.58e-08,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.01e-21!143;DOID:305!1.43e-19!106;DOID:162!7.72e-09!235;DOID:14566!7.20e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:305;3.42e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.40e-22,143;DOID:305,5.97e-21,106;DOID:162,1.93e-11,235;DOID:14566,1.32e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0000062!8.04e-12!511;UBERON:0000468!2.04e-10!659;UBERON:0004119!1.46e-09!169;UBERON:0000925!1.46e-09!169;UBERON:0006595!1.46e-09!169;UBERON:0000467!2.51e-09!625;UBERON:0000480!4.26e-09!626;UBERON:0004921!5.06e-08!129;UBERON:0004185!5.06e-08!129;UBERON:0006554!6.33e-08!44;UBERON:0000922!8.53e-08!612;UBERON:0001007!1.33e-07!155;UBERON:0001555!1.33e-07!155;UBERON:0007026!1.33e-07!155;UBERON:0001008!2.45e-07!45;UBERON:0005177!3.55e-07!107;UBERON:0002050!3.90e-07!605;UBERON:0005423!3.90e-07!605;UBERON:0000464!5.04e-07!104;UBERON:0000923!6.21e-07!604;UBERON:0005291!6.21e-07!604;UBERON:0006598!6.21e-07!604;UBERON:0002532!6.21e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.82e-07;30!UBERON:0001008;2.82e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.52e-08,101;UBERON:0004119,1.37e-07,160;UBERON:0000925,1.37e-07,160;UBERON:0006595,1.37e-07,160;UBERON:0006554,3.43e-07,47;UBERON:0008947,6.31e-07,38;UBERON:0003258,6.31e-07,38;UBERON:0000065,7.07e-07,54;UBERON:0001004,7.87e-07,74;UBERON:0001008,8.81e-07,48 | |||
|phase1_expression=2.18014055124668,1.07050261945492,0.704772020479856,1.0007329835313,2.68176656656373,0,2.53299878168311,0,0,1.22866968250754,9.07141518364156,0.655324116390517,1.84636884759917,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,2.46242116153576,2.04000691244253,2.19418305034661,7.15589967827642,6.02247470320691,10.2944964467738,0.229240217243854,0,0,5.90046415273356,1.15148819429164,2.01260960310899,4.59710612239464,3.0120591877825,4.80680213216824,0,0,0.587200878669695,2.21598163412751,2.60707781711184,1.51907609501096,0,0,0,0.436194716338694,2.64513160582167,2.18325655069035,1.39457422143411,4.93401465626191,4.64559556342655,2.58923153089935,3.84241059793651,1.41889337933151,3.44745680736619,9.03678557017357,2.70852973188684,0.752969358170419,4.36649840092553,4.26974620445661,2.75475503133812,5.45579346029359,4.47535988059329,0,1.79517291859469,2.55734850319616,1.7412554317715,3.97169657283798,1.86846674698672,4.01997864410789,1.0429658368404,2.6062661364614,2.42159801053347,4.05105399586321,3.16462387440884,8.23895616616573,15.0949052975181,3.14487968262564,0.336985893439485,0.750884464207532,0,29.6413253490899,18.4992509795154,11.8731699947012,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.89151321907653,1.00267582127178,0.289693037921647,0,0,0.472674085820339,1.33037638477538,1.14185221401064,1.57174890597255,4.00724817121796,7.04490441290416,0,0,0,0,2.28797964312051,0.371457501329565,0.39752481473341,0,1.38856200643038,1.13061588384802,2.09749718104953,2.47606237746061,1.46296476575767,1.03366703667732,1.42306505074684,1.33888245105868,2.01414658554573,3.80136052859256,6.83373761134875,1.10298924103761,5.67099363517232,0.446498641420399,0.44905874525234,0.450445921933289,1.53316637465883,0.949265659568129,0.916008719652036,1.31780417436063,0,10.0301631992783,0.496971951695318,0.886413581652058,0.397227542439656,0,0.354668382198357,1.68203280042692,4.2699598291882,11.5933747756065,0,2.55950276932407,0.653847612453835,0.605429710579726,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0.368502951935304,0.103325781175765,1.18800285728205,1.97813543422845,0,0,0,0.250237039743928,0.554128230968366,0.438977620880838,0.30648779579902,2.55404700141215,2.60894021268048,1.07633781413317,2.98980344345994,0.847727604638247,2.10063767259082,0.515262646192195,0.257640540045629,0.930584281657949,1.5189869901714,0.194874010322397,0.504867548488229,1.01254888506529,0.969876340912871,2.4850671476163,1.20902517873168,3.89989362314122,2.12586938479627,1.63647672354501,2.00763216772303,1.82960559194393,0.662648841607426,1.74290914304278,2.48786532036889,1.26160425437814,0,0,0,0,0,0.721879481669586,8.28147600278907,7.92348043367078,6.50729780685401,7.49999014580279,7.84365998732662,7.1181185733329,9.03369764673102,4.90553662813365,9.23393176671337,2.21446636387394,2.80483547606892,0.8231480226628,0,0,0,0.590789906681404,17.658523976586,6.76436411987125,0,3.18275827685014,1.1240175325762,3.82010095164197,0.370353780634118,0.651616610620649,0,0,3.36198174427723,0.352226082707465,0.577465791044295,1.38895653772983,0.951270761172991,19.7551099489819,21.4621540523718,0,0,0,6.56136837907439,2.35174979478403,1.55952606966625,0.626909658919938,0.290633938513962,2.30029607499127,0,0,1.4512968087854,0.288239906833923,0.75745460055828,6.03229995775606,13.3695948945397,5.86087236050235,3.4214489204541,7.09509699652932,10.2116639666932,2.00078502841405,0.448524337381443,2.1798003441664,0.66004457238855,1.93907573636667,0,0.845302752556,1.32969058292435,0,0.514414748524284,0,0,1.00084595560703,0,0,0.325736184293735,0.710783897485092,0,0,0.871533458600294,0.799783929456456,0,0,0,5.99062138728957,6.89171615004683,0,0,0,0.358121926479791,0,0,0,0.128343036279748,3.55732473911449,0,7.73288812777695,5.02548796003046,6.37938751653163,1.49801404789436,0,0.414415513436035,0,0,0,17.4695523685878,6.78030157429215,5.36188211115378,4.09994952474496,0.300946099727719,0,4.1389228517002,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,1.03384013061444,0.862856803274467,0.640365346820666,19.7032921440069,0,0.907170879989041,0.496215615637554,0.61384789315225,0.841980283299221,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0,0,0,0,10.5147721144711,16.4415305648694,10.2209897718845,0.574072240823034,0,1.31124414959424,5.41439535488894,3.69673618101191,5.49044838423799,10.2297457257282,2.21658420675039,1.13733384070897,0.680374821106063,1.72732732881711,6.16909010761157,2.16757150035082,4.51520796469368,3.82314409567557,14.1282921517883,6.04461837749881,0,0,1.02580050046556,0.656029291399411,1.30151357865721,0.824328093181778,4.2121953816438,3.05285149706176,2.29706215198469,6.50060246036521,0,0,0,0,0.275673144969061,0,0.145016693914229,0.340906509664404,0.623224249527161,6.28082678371717,11.7235941092715,5.48734663726712,11.5319870175327,0.464845549297286,0.62962469366128,0,0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| |||
|short_description=p2@HES4 | |||
}} |
Latest revision as of 21:10, 19 September 2015
Short description: | p2@HES4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HES4_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000481869_5end |
EntrezGene: | HES4 |
HGNC: | 24149 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.31e-33 | 253 |
endo-epithelial cell | 7.88e-10 | 42 |
endodermal cell | 1.53e-09 | 58 |
ecto-epithelial cell | 9.58e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.52e-08 | 101 |
endoderm-derived structure | 1.37e-07 | 160 |
endoderm | 1.37e-07 | 160 |
presumptive endoderm | 1.37e-07 | 160 |
urinary system structure | 3.43e-07 | 47 |
respiratory primordium | 6.31e-07 | 38 |
endoderm of foregut | 6.31e-07 | 38 |
respiratory tract | 7.07e-07 | 54 |
respiratory system | 7.87e-07 | 74 |
renal system | 8.81e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.40e-22 | 143 |
carcinoma | 5.97e-21 | 106 |
cancer | 1.93e-11 | 235 |
disease of cellular proliferation | 1.32e-10 | 239 |