FFCP PHASE1:Hg19::chrX:148622513..148622612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91966 | |EntrezGene=91966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28089 | |HGNC=28089 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA72,E7ENU3,Q8TE69 | |UniProt=D6RA72,E7ENU3,Q8TE69 | ||
|association_with_transcript=0bp_to_ENST00000393985,ENST00000423421,ENST00000423540,ENST00000434353,ENST00000514208,NM_001171907,NM_001171908,NM_178124,uc004fdd.2,uc004fde.1,uc004fdf.2,uc004fdg.2,uc004fdh.2,uc010nsy.2,uc011mxm.1,uc011mxn.1,uc011mxo.1_5end | |association_with_transcript=0bp_to_ENST00000393985,ENST00000423421,ENST00000423540,ENST00000434353,ENST00000514208,NM_001171907,NM_001171908,NM_178124,uc004fdd.2,uc004fde.1,uc004fdf.2,uc004fdg.2,uc004fdh.2,uc010nsy.2,uc011mxm.1,uc011mxn.1,uc011mxo.1_5end | ||
|cluster_id=chrX:148622513..148622612,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_CXorf40A_5end | |description=CAGE_peak_1_at_CXorf40A_5end | ||
|id=chrX:148622513..148622612,+ | |id=chrX:148622513..148622612,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.08e-18!140;CL:0000988!3.37e-18!182;CL:0000037!7.44e-18!172;CL:0000566!7.44e-18!172;CL:0000838!2.38e-16!52;CL:0002032!2.87e-16!165;CL:0000837!2.87e-16!165;CL:0000542!2.96e-16!53;CL:0000051!2.96e-16!53;CL:0002031!3.24e-14!124;CL:0002087!4.19e-13!119;CL:0000791!8.67e-10!18;CL:0000789!8.67e-10!18;CL:0002420!8.67e-10!18;CL:0002419!8.67e-10!18;CL:0000790!8.67e-10!18;CL:0000084!2.56e-09!25;CL:0000827!2.56e-09!25;CL:0000945!6.68e-07!24;CL:0000826!6.68e-07!24;CL:0002320!7.54e-07!365;CL:0000134!8.06e-07!358 | |ontology_enrichment_celltype=CL:0000738!1.08e-18!140;CL:0000988!3.37e-18!182;CL:0000037!7.44e-18!172;CL:0000566!7.44e-18!172;CL:0000838!2.38e-16!52;CL:0002032!2.87e-16!165;CL:0000837!2.87e-16!165;CL:0000542!2.96e-16!53;CL:0000051!2.96e-16!53;CL:0002031!3.24e-14!124;CL:0002087!4.19e-13!119;CL:0000791!8.67e-10!18;CL:0000789!8.67e-10!18;CL:0002420!8.67e-10!18;CL:0002419!8.67e-10!18;CL:0000790!8.67e-10!18;CL:0000084!2.56e-09!25;CL:0000827!2.56e-09!25;CL:0000945!6.68e-07!24;CL:0000826!6.68e-07!24;CL:0002320!7.54e-07!365;CL:0000134!8.06e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.10e-10;18!CL:0000789;7.10e-10;18!CL:0002419;7.10e-10;18!CL:0000542;1.07e-09;53!CL:0000084;2.40e-09;25!CL:0000945;6.14e-07;24!CL:0000451;8.99e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.48e-19,136;CL:0000988,8.20e-19,177;CL:0000037,1.47e-18,168;CL:0002032,6.04e-17,161;CL:0000837,6.04e-17,161;CL:0000838,2.38e-16,52;CL:0000542,2.95e-16,53;CL:0000051,2.95e-16,53;CL:0002031,5.54e-15,120;CL:0002087,7.60e-14,115;CL:0000791,8.67e-10,18;CL:0000789,8.67e-10,18;CL:0002420,8.67e-10,18;CL:0002419,8.67e-10,18;CL:0000790,8.67e-10,18;CL:0000084,2.56e-09,25;CL:0000827,2.56e-09,25;CL:0000945,6.68e-07,24;CL:0000826,6.68e-07,24;CL:0002320,8.49e-07,361;CL:0000134,9.05e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;7.10e-10;18!CL:0000051;1.07e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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3287383099 | ||
|short_description=p1@CXorf40A | |short_description=p1@CXorf40A | ||
}} | }} |
Latest revision as of 21:42, 19 September 2015
Short description: | p1@CXorf40A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXorf40A_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000393985, ENST00000423421, ENST00000423540, ENST00000434353, ENST00000514208, NM_001171907, NM_001171908, NM_178124, uc004fdd.2, uc004fde.1, uc004fdf.2, uc004fdg.2, uc004fdh.2, uc010nsy.2, uc011mxm.1, uc011mxn.1, uc011mxo.1_5end |
EntrezGene: | CXorf40A |
HGNC: | 28089 |
UniProt: | D6RA72E7ENU3Q8TE69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.48e-19 | 136 |
hematopoietic cell | 8.20e-19 | 177 |
hematopoietic stem cell | 1.47e-18 | 168 |
hematopoietic oligopotent progenitor cell | 6.04e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.04e-17 | 161 |
lymphoid lineage restricted progenitor cell | 2.38e-16 | 52 |
lymphocyte | 2.95e-16 | 53 |
common lymphoid progenitor | 2.95e-16 | 53 |
hematopoietic lineage restricted progenitor cell | 5.54e-15 | 120 |
nongranular leukocyte | 7.60e-14 | 115 |
mature alpha-beta T cell | 8.67e-10 | 18 |
alpha-beta T cell | 8.67e-10 | 18 |
immature T cell | 8.67e-10 | 18 |
mature T cell | 8.67e-10 | 18 |
immature alpha-beta T cell | 8.67e-10 | 18 |
T cell | 2.56e-09 | 25 |
pro-T cell | 2.56e-09 | 25 |
lymphocyte of B lineage | 6.68e-07 | 24 |
pro-B cell | 6.68e-07 | 24 |
connective tissue cell | 8.49e-07 | 361 |
mesenchymal cell | 9.05e-07 | 354 |