FFCP PHASE1:Hg19::chr17:37821266..37821276,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8557 | |EntrezGene=8557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11610 | |HGNC=11610 | ||
|TSSclassifier=strong | |||
|UniProt=A2TDC0,O15273 | |UniProt=A2TDC0,O15273 | ||
|association_with_transcript=-322bp_to_NM_003673,uc002hsh.2_5end | |association_with_transcript=-322bp_to_NM_003673,uc002hsh.2_5end | ||
|cluster_id=chr17:37821266..37821276,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_TCAP_5end | |description=CAGE_peak_3_at_TCAP_5end | ||
|id=chr17:37821266..37821276,+ | |id=chr17:37821266..37821276,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;9.79e-26;1!UBERON:0004874;9.79e-26;1!UBERON:0008814;9.40e-14;2!UBERON:0010056;9.40e-14;2!UBERON:0005062;1.92e-07;4!UBERON:0007284;1.92e-07;4 | |||
|ontology_enrichment_disease=DOID:114!1.88e-21!2;DOID:178!1.97e-11!1;DOID:326!1.97e-11!1;DOID:3978!1.97e-11!1;DOID:3394!1.97e-11!1;DOID:5844!1.97e-11!1;DOID:1287!3.29e-11!4 | |ontology_enrichment_disease=DOID:114!1.88e-21!2;DOID:178!1.97e-11!1;DOID:326!1.97e-11!1;DOID:3978!1.97e-11!1;DOID:3394!1.97e-11!1;DOID:5844!1.97e-11!1;DOID:1287!3.29e-11!4 | ||
|ontology_enrichment_disease_v019=DOID:114;6.43e-14;2!DOID:1287;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.43e-14,2;DOID:1287,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!6.89e-23!27;UBERON:0001630!9.53e-21!2;UBERON:0005090!9.53e-21!2;UBERON:0007023!2.43e-17!115;UBERON:0001723!1.98e-14!3;UBERON:0001033!1.98e-14!3;UBERON:0010056!1.98e-14!3;UBERON:0003978!2.12e-14!3;UBERON:0009751!2.12e-14!3;UBERON:0004151!2.12e-14!3;UBERON:0000946!2.12e-14!3;UBERON:0002523!2.12e-14!3;UBERON:0005983!2.12e-14!3;UBERON:0002165!2.12e-14!3;UBERON:0002062!2.12e-14!3;UBERON:0007280!2.12e-14!3;UBERON:0003103!3.72e-13!69;UBERON:0002084!1.45e-11!1;UBERON:0002082!1.45e-11!1;UBERON:0004706!1.45e-11!1;UBERON:0000989!1.60e-11!1;UBERON:0008811!1.60e-11!1;UBERON:0006258!1.60e-11!1;UBERON:0005876!1.60e-11!1;UBERON:0004874!1.60e-11!1;UBERON:0002146!1.78e-11!1;UBERON:0005623!1.78e-11!1;UBERON:0002135!2.18e-11!1;UBERON:0002426!2.42e-11!1;UBERON:0003831!2.42e-11!1;UBERON:0003898!2.42e-11!1;UBERON:0004830!2.42e-11!1;UBERON:0001774!2.42e-11!1;UBERON:0003830!2.42e-11!1;UBERON:0005175!2.42e-11!1;UBERON:0003897!2.42e-11!1;UBERON:0001103!2.42e-11!1;UBERON:0010084!2.42e-11!1;UBERON:0002079!2.68e-11!1;UBERON:0005418!3.63e-11!1;UBERON:0001389!3.63e-11!1;UBERON:0000026!3.63e-11!1;UBERON:0008784!3.63e-11!1;UBERON:0006058!3.63e-11!1;UBERON:0003663!3.63e-11!1;UBERON:0001383!3.63e-11!1;UBERON:0004256!3.63e-11!1;UBERON:0002529!3.63e-11!1;UBERON:0004708!3.63e-11!1;UBERON:0002101!3.63e-11!1;UBERON:0004709!3.63e-11!1;UBERON:0003661!3.63e-11!1;UBERON:0002471!3.63e-11!1;UBERON:0004357!3.63e-11!1;UBERON:0009872!3.63e-11!1;UBERON:0004347!3.63e-11!1;UBERON:0005420!3.63e-11!1;UBERON:0005732!3.63e-11!1;UBERON:0006057!3.63e-11!1;UBERON:0000978!3.63e-11!1;UBERON:0002103!3.63e-11!1;UBERON:0001665!3.63e-11!1;UBERON:0003823!3.63e-11!1;UBERON:0000154!3.63e-11!1;UBERON:0005733!3.63e-11!1;UBERON:0005730!3.63e-11!1;UBERON:0001831!4.01e-11!1;UBERON:0001567!4.01e-11!1;UBERON:0008801!4.01e-11!1;UBERON:0002372!5.43e-11!1;UBERON:0001961!5.43e-11!1;UBERON:0001744!5.43e-11!1;UBERON:0001735!5.43e-11!1;UBERON:0000948!2.59e-10!24;UBERON:0005498!2.59e-10!24;UBERON:0004140!2.59e-10!24;UBERON:0009881!2.59e-10!24;UBERON:0004141!2.59e-10!24;UBERON:0003084!2.59e-10!24;UBERON:0007005!2.59e-10!24;UBERON:0004139!2.59e-10!24;UBERON:0004291!2.59e-10!24;UBERON:0001042!1.58e-09!10;UBERON:0009145!1.58e-09!10;UBERON:0000078!4.99e-09!18;UBERON:0006562!1.04e-08!11;UBERON:0000166!9.20e-08!21 | |ontology_enrichment_uberon=UBERON:0007100!6.89e-23!27;UBERON:0001630!9.53e-21!2;UBERON:0005090!9.53e-21!2;UBERON:0007023!2.43e-17!115;UBERON:0001723!1.98e-14!3;UBERON:0001033!1.98e-14!3;UBERON:0010056!1.98e-14!3;UBERON:0003978!2.12e-14!3;UBERON:0009751!2.12e-14!3;UBERON:0004151!2.12e-14!3;UBERON:0000946!2.12e-14!3;UBERON:0002523!2.12e-14!3;UBERON:0005983!2.12e-14!3;UBERON:0002165!2.12e-14!3;UBERON:0002062!2.12e-14!3;UBERON:0007280!2.12e-14!3;UBERON:0003103!3.72e-13!69;UBERON:0002084!1.45e-11!1;UBERON:0002082!1.45e-11!1;UBERON:0004706!1.45e-11!1;UBERON:0000989!1.60e-11!1;UBERON:0008811!1.60e-11!1;UBERON:0006258!1.60e-11!1;UBERON:0005876!1.60e-11!1;UBERON:0004874!1.60e-11!1;UBERON:0002146!1.78e-11!1;UBERON:0005623!1.78e-11!1;UBERON:0002135!2.18e-11!1;UBERON:0002426!2.42e-11!1;UBERON:0003831!2.42e-11!1;UBERON:0003898!2.42e-11!1;UBERON:0004830!2.42e-11!1;UBERON:0001774!2.42e-11!1;UBERON:0003830!2.42e-11!1;UBERON:0005175!2.42e-11!1;UBERON:0003897!2.42e-11!1;UBERON:0001103!2.42e-11!1;UBERON:0010084!2.42e-11!1;UBERON:0002079!2.68e-11!1;UBERON:0005418!3.63e-11!1;UBERON:0001389!3.63e-11!1;UBERON:0000026!3.63e-11!1;UBERON:0008784!3.63e-11!1;UBERON:0006058!3.63e-11!1;UBERON:0003663!3.63e-11!1;UBERON:0001383!3.63e-11!1;UBERON:0004256!3.63e-11!1;UBERON:0002529!3.63e-11!1;UBERON:0004708!3.63e-11!1;UBERON:0002101!3.63e-11!1;UBERON:0004709!3.63e-11!1;UBERON:0003661!3.63e-11!1;UBERON:0002471!3.63e-11!1;UBERON:0004357!3.63e-11!1;UBERON:0009872!3.63e-11!1;UBERON:0004347!3.63e-11!1;UBERON:0005420!3.63e-11!1;UBERON:0005732!3.63e-11!1;UBERON:0006057!3.63e-11!1;UBERON:0000978!3.63e-11!1;UBERON:0002103!3.63e-11!1;UBERON:0001665!3.63e-11!1;UBERON:0003823!3.63e-11!1;UBERON:0000154!3.63e-11!1;UBERON:0005733!3.63e-11!1;UBERON:0005730!3.63e-11!1;UBERON:0001831!4.01e-11!1;UBERON:0001567!4.01e-11!1;UBERON:0008801!4.01e-11!1;UBERON:0002372!5.43e-11!1;UBERON:0001961!5.43e-11!1;UBERON:0001744!5.43e-11!1;UBERON:0001735!5.43e-11!1;UBERON:0000948!2.59e-10!24;UBERON:0005498!2.59e-10!24;UBERON:0004140!2.59e-10!24;UBERON:0009881!2.59e-10!24;UBERON:0004141!2.59e-10!24;UBERON:0003084!2.59e-10!24;UBERON:0007005!2.59e-10!24;UBERON:0004139!2.59e-10!24;UBERON:0004291!2.59e-10!24;UBERON:0001042!1.58e-09!10;UBERON:0009145!1.58e-09!10;UBERON:0000078!4.99e-09!18;UBERON:0006562!1.04e-08!11;UBERON:0000166!9.20e-08!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;9.79e-26;1!UBERON:0000989;9.79e-26;1!UBERON:0002146;9.79e-26;1!UBERON:0008811;9.79e-26;1!UBERON:0002082;9.79e-26;1!UBERON:0005623;9.79e-26;1!UBERON:0007100;2.79e-16;25!UBERON:0000341;9.40e-14;2!UBERON:0001723;1.30e-09;3!UBERON:0001033;1.30e-09;3!UBERON:0003978;1.67e-09;3!UBERON:0004151;1.67e-09;3!UBERON:0000946;1.67e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,7.62e-26,1;UBERON:0002082,7.62e-26,1;UBERON:0010226,7.62e-26,1;UBERON:0000989,9.79e-26,1;UBERON:0008811,9.79e-26,1;UBERON:0006258,9.79e-26,1;UBERON:0005876,9.79e-26,1;UBERON:0004874,9.79e-26,1;UBERON:0002146,1.26e-25,1;UBERON:0005623,1.26e-25,1;UBERON:0007100,4.27e-15,27;UBERON:0007023,6.68e-14,114;UBERON:0000341,8.28e-14,2;UBERON:0001723,1.30e-09,3;UBERON:0001033,1.30e-09,3;UBERON:0010056,1.30e-09,3;UBERON:0004151,1.54e-09,3;UBERON:0003978,1.81e-09,3;UBERON:0009751,1.81e-09,3;UBERON:0000946,1.81e-09,3;UBERON:0002523,1.81e-09,3;UBERON:0005983,1.81e-09,3;UBERON:0002165,1.81e-09,3;UBERON:0002062,1.81e-09,3;UBERON:0007280,1.81e-09,3;UBERON:0003103,2.40e-09,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.837847203816763,1.14580212005842,0,0.998395002494955,4.72148652950228,2.00854311697685,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,3.90118666053739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0,0,0,0,0.0636471582781649,0,2.17716747896961,0.684466602170562,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.837847203816763,1.14580212005842,0,0.998395002494955,4.72148652950228,2.00854311697685,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,3.90118666053739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0,0,0,0,0.0636471582781649,0,2.17716747896961,0.684466602170562,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TCAP | |short_description=p3@TCAP | ||
}} | }} |
Latest revision as of 22:07, 19 September 2015
Short description: | p3@TCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TCAP_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -322bp_to_NM_003673, uc002hsh.2_5end |
EntrezGene: | TCAP |
HGNC: | 11610 |
UniProt: | A2TDC0O15273 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 7.62e-26 | 1 |
cardiac ventricle | 7.62e-26 | 1 |
future cardiac ventricle | 7.62e-26 | 1 |
penis | 9.79e-26 | 1 |
intromittent organ | 9.79e-26 | 1 |
lateral plate mesenchyme | 9.79e-26 | 1 |
undifferentiated genital tubercle | 9.79e-26 | 1 |
somatopleure | 9.79e-26 | 1 |
pulmonary valve | 1.26e-25 | 1 |
semi-lunar valve | 1.26e-25 | 1 |
primary circulatory organ | 4.27e-15 | 27 |
adult organism | 6.68e-14 | 114 |
throat | 8.28e-14 | 2 |
tongue | 1.30e-09 | 3 |
gustatory system | 1.30e-09 | 3 |
future tongue | 1.30e-09 | 3 |
cardiac chamber | 1.54e-09 | 3 |
valve | 1.81e-09 | 3 |
cardiac mesenchyme | 1.81e-09 | 3 |
cardial valve | 1.81e-09 | 3 |
tunica intima | 1.81e-09 | 3 |
heart layer | 1.81e-09 | 3 |
endocardium | 1.81e-09 | 3 |
endocardial cushion | 1.81e-09 | 3 |
presumptive endocardium | 1.81e-09 | 3 |
compound organ | 2.40e-09 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.43e-14 | 2 |
cardiovascular system disease | 1.31e-07 | 4 |