FFCP PHASE1:Hg19::chr15:92937073..92937133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8128 | |EntrezGene=8128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10870 | |HGNC=10870 | ||
|TSSclassifier=strong | |||
|UniProt=B2R9U8,Q92186 | |UniProt=B2R9U8,Q92186 | ||
|association_with_transcript=-6bp_to_NM_006011,uc002bra.2,uc002brb.2_5end | |association_with_transcript=-6bp_to_NM_006011,uc002bra.2,uc002brb.2_5end | ||
|cluster_id=chr15:92937073..92937133,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_ST8SIA2_5end | |description=CAGE_peak_1_at_ST8SIA2_5end | ||
|id=chr15:92937073..92937133,+ | |id=chr15:92937073..92937133,+ | ||
|ontology_enrichment_celltype=CL:0000133!5.01e-11!59;CL:0000221!2.00e-10!71;CL:0002319!5.04e-10!25;CL:0002620!1.46e-09!23;CL:0000047!2.99e-08!8;CL:0000128!3.11e-08!7;CL:0000126!3.11e-08!7;CL:0000127!3.11e-08!7;CL:0002453!3.11e-08!7;CL:0000333!2.59e-07!41 | |ontology_enrichment_celltype=CL:0000133!5.01e-11!59;CL:0000221!2.00e-10!71;CL:0002319!5.04e-10!25;CL:0002620!1.46e-09!23;CL:0000047!2.99e-08!8;CL:0000128!3.11e-08!7;CL:0000126!3.11e-08!7;CL:0000127!3.11e-08!7;CL:0002453!3.11e-08!7;CL:0000333!2.59e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.25e-14;25!CL:0000128;5.48e-14;7!CL:0000126;5.48e-14;7!CL:0000127;5.48e-14;7!CL:0000540;1.42e-10;6!CL:0000404;1.42e-10;6!CL:0002321;1.07e-09;15!CL:0002620;1.53e-09;23!CL:0002605;5.42e-07;3!CL:0002603;5.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.53e-15,59;CL:0002319,1.45e-14,25;CL:0000047,5.19e-14,8;CL:0000128,5.56e-14,7;CL:0000126,5.56e-14,7;CL:0000127,5.56e-14,7;CL:0002453,5.56e-14,7;CL:0000333,5.64e-11,41;CL:0000221,5.71e-11,72;CL:0000540,1.72e-10,6;CL:0000031,1.72e-10,6;CL:0000404,1.72e-10,6;CL:0002620,1.59e-09,23;CL:0002605,5.40e-07,3;CL:0002603,5.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.42e-10;6!CL:0000133;9.02e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.05e-09;22!DOID:2994;4.05e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.83e-09,22;DOID:2994,2.83e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!3.64e-16!173;UBERON:0006601!3.64e-16!173;UBERON:0000073!1.48e-15!94;UBERON:0001016!1.48e-15!94;UBERON:0004121!3.79e-15!169;UBERON:0005743!2.91e-14!86;UBERON:0001017!1.44e-13!82;UBERON:0000153!9.88e-11!129;UBERON:0007811!9.88e-11!129;UBERON:0000475!3.31e-10!365;UBERON:0002097!4.34e-10!40;UBERON:0000033!6.79e-10!123;UBERON:0000955!6.74e-09!69;UBERON:0006238!6.74e-09!69;UBERON:0002199!5.81e-08!45;UBERON:0002416!5.81e-08!45;UBERON:0002616!1.15e-07!59;UBERON:0000468!1.54e-07!659;UBERON:0002346!2.99e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.95e-12;49!UBERON:0002097;6.53e-08;41!UBERON:0002067;5.44e-07;9!UBERON:0001134;6.94e-07;16!UBERON:0002036;6.94e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.11e-10,41;UBERON:0001016,4.78e-09,89;UBERON:0002199,1.74e-08,46;UBERON:0002416,1.74e-08,46;UBERON:0004121,1.80e-07,171;UBERON:0000924,1.80e-07,171;UBERON:0006601,1.80e-07,171;UBERON:0001017,2.59e-07,81;UBERON:0002067,4.45e-07,9;UBERON:0004016,4.45e-07,9;UBERON:0010083,4.45e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0,0,0,0,0,0,0,13.912679562677,11.2200380184339,11.2843699732112,10.304495536718,18.4780473848394,15.4417446701607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.945348171640679,0,0.614843499851882,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0.44905874525234,0,3.06633274931766,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0,1.87895197830024,5.82742599725274,6.46073710830343,0,0.61417158655884,0,1.18800285728205,0.741800787835671,0,0,4.37673896280572,3.00284447692714,0,0.877955241761676,0,0,0,6.81680615617675,1.2813443329114,1.27159140695737,0.600182192168805,0.103052529238439,1.28820270022815,0.37223371266318,3.71307930930786,0.779496041289589,1.7670364197088,1.10459878370759,0,10.2952781829818,4.63459651847145,1.01736355386293,1.35282597214308,0,0,0.731842236777572,0.397589304964456,1.51052125730374,2.90250954043037,2.52320850875628,2.18986415445498,6.25798129319264,5.14592750554308,5.52539685409922,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,4.20725321410337,0,0,0,0,0,0,0,0.343135620597051,0.768251997860379,0,0.301586917234893,0,0,0,0,3.70977295920246,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0,0,0.581267877027924,1.91691339582606,0,0,0,0,0,0.571481048629521,2.29193055334967,0,0,0.411309970813294,0,0,0.336393253036082,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,0,1.02882949704857,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,2.85273810081437,1.15825045334063,0.205476322550383,2.32779252211864,0,0,0,0.128343036279748,10.1637849688985,53.3573400816249,27.0651084472193,37.1886109042254,40.1901413541493,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,2.0694614258501,0,0.184369168541703,0.0868836144680828,3.91602314925481,12.3531632571908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,1.35359883872224,1.38627606787947,0,1.46139224653261,1.26661954671451,0,0.170093705276516,0.647747748306418,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,2.0148727924996,0.219259876645935,0,0.769350375349168,0.328014645699706,0,0.103041011647722,0,0,0,0.650060246036521,0,1.35339005608971,0.154048617114644,0.460511024178389,1.7918754422989,0,1.0151168573996,1.61930592090592,10.2386840993748,0,0,0,0,0,0,0,1.23213432070436,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3246373947405,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0.281338832821026,2.22617410045812,0,0.211125408127993,0,0,0,9.81779352020686,0,1.55519793830904,0,0,0,0.197286811273867,0,3.33410970433911,0,0.0927680981618513,87.8300711205254,0,0,0,0,0,0,0,0,6.42412481253181,0,0.844175070377856,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,3.05515072466813,0,0,0,0,0,0,0,0,0,0,0,59.9902612795761,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,1.04135843001079,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0.253243183823515,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,1.20084057741958,0.136905378891993,0,0,0,0,0.916641696046735,0,1.79711100449092,1.71690419254628,0.446342914883745,4.16537529417703,0,0,0,0,0,0,0,0.795229689809303,0,1.12527203925513,1.2378549293751,1.66176135211674,0.449947783103001,0,0.91124334987037,0,0.157611414598396,1.20645552710496,0,4.12360880465543,0,2.1440859791201,1.98627591109629,0,0.542999601753713,0,0,0,1.8881279772348,6.64513284963145,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.628817220398664,0,0,3.557009374163,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0.665574309221114,0.683060432355218,9.96110171540862,0.124980407962107,0,1.14186133417987,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0,0.214821114084977,0,0,15.601082821863,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,10.2315497042921,10.7824811396682,0,4.58680480406458,0,11.2664707653892,3.84200869202907,1.67593475391973,0.636008701306837,0.630893960010027,0,0.705351887381368,0.3062454773532,0.385375350578757,0,0,0.205116364240755,105.113897324456,0,0.3229512912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| ||
|short_description=p1@ST8SIA2 | |short_description=p1@ST8SIA2 | ||
}} | }} |
Latest revision as of 22:39, 19 September 2015
Short description: | p1@ST8SIA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST8SIA2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -6bp_to_NM_006011, uc002bra.2, uc002brb.2_5end |
EntrezGene: | ST8SIA2 |
HGNC: | 10870 |
UniProt: | B2R9U8Q92186 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.53e-15 | 59 |
neural cell | 1.45e-14 | 25 |
neuronal stem cell | 5.19e-14 | 8 |
oligodendrocyte | 5.56e-14 | 7 |
macroglial cell | 5.56e-14 | 7 |
astrocyte | 5.56e-14 | 7 |
oligodendrocyte precursor cell | 5.56e-14 | 7 |
migratory neural crest cell | 5.64e-11 | 41 |
ectodermal cell | 5.71e-11 | 72 |
neuron | 1.72e-10 | 6 |
neuroblast | 1.72e-10 | 6 |
electrically signaling cell | 1.72e-10 | 6 |
skin fibroblast | 1.59e-09 | 23 |
astrocyte of the cerebral cortex | 5.40e-07 | 3 |
astrocyte of the cerebellum | 5.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.11e-10 | 41 |
nervous system | 4.78e-09 | 89 |
integument | 1.74e-08 | 46 |
integumental system | 1.74e-08 | 46 |
ectoderm-derived structure | 1.80e-07 | 171 |
ectoderm | 1.80e-07 | 171 |
presumptive ectoderm | 1.80e-07 | 171 |
central nervous system | 2.59e-07 | 81 |
dermis | 4.45e-07 | 9 |
dermatome | 4.45e-07 | 9 |
future dermis | 4.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.83e-09 | 22 |
germ cell cancer | 2.83e-09 | 22 |