FFCP PHASE1:Hg19::chr9:107665982..107665994,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=19 | |EntrezGene=19 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=29 | |HGNC=29 | ||
|TSSclassifier=strong | |||
|UniProt=O95477,B7XCW9 | |UniProt=O95477,B7XCW9 | ||
|association_with_transcript=-22bp_to_AB055982,AB445477_5end | |association_with_transcript=-22bp_to_AB055982,AB445477_5end | ||
|cluster_id=chr9:107665982..107665994,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_ABCA1_5end | |description=CAGE_peak_5_at_ABCA1_5end | ||
|id=chr9:107665982..107665994,- | |id=chr9:107665982..107665994,- | ||
|ontology_enrichment_celltype=CL:0000181!4.34e-14!12;CL:0000417!4.34e-14!12;CL:0000668!4.34e-14!12;CL:0000414!4.34e-14!12;CL:0000412!4.34e-14!12;CL:0000182!4.34e-14!12;CL:0002322!2.71e-08!5 | |ontology_enrichment_celltype=CL:0000181!4.34e-14!12;CL:0000417!4.34e-14!12;CL:0000668!4.34e-14!12;CL:0000414!4.34e-14!12;CL:0000412!4.34e-14!12;CL:0000182!4.34e-14!12;CL:0002322!2.71e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.58e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.57e-59,12;CL:0000223,2.85e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.46e-45;11!UBERON:0009497;5.72e-38;13!UBERON:0001041;1.30e-16;30!UBERON:0003104;4.76e-16;31!CL:0000223;3.59e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.00e-19!19;UBERON:0006925!4.00e-19!19;UBERON:0008836!4.00e-19!19;UBERON:0005057!1.18e-16!26;UBERON:0008835!2.78e-16!22;UBERON:0003894!2.78e-16!22;UBERON:0009854!1.69e-15!23;UBERON:0007499!4.01e-14!25;UBERON:0009497!4.01e-14!25;UBERON:0000015!4.01e-14!25;UBERON:0002423!4.01e-14!25;UBERON:0006235!4.01e-14!25;UBERON:0004161!4.01e-14!25;UBERON:0002365!1.41e-13!31;UBERON:0002330!1.41e-13!31;UBERON:0009856!1.63e-13!26;UBERON:0002368!1.32e-09!35;UBERON:0002405!7.48e-09!115;UBERON:0003929!2.27e-08!54;UBERON:0002530!1.63e-07!59;UBERON:0000949!4.17e-07!45;UBERON:0005172!7.72e-07!55;UBERON:0005173!7.72e-07!55 | |ontology_enrichment_uberon=UBERON:0002107!4.00e-19!19;UBERON:0006925!4.00e-19!19;UBERON:0008836!4.00e-19!19;UBERON:0005057!1.18e-16!26;UBERON:0008835!2.78e-16!22;UBERON:0003894!2.78e-16!22;UBERON:0009854!1.69e-15!23;UBERON:0007499!4.01e-14!25;UBERON:0009497!4.01e-14!25;UBERON:0000015!4.01e-14!25;UBERON:0002423!4.01e-14!25;UBERON:0006235!4.01e-14!25;UBERON:0004161!4.01e-14!25;UBERON:0002365!1.41e-13!31;UBERON:0002330!1.41e-13!31;UBERON:0009856!1.63e-13!26;UBERON:0002368!1.32e-09!35;UBERON:0002405!7.48e-09!115;UBERON:0003929!2.27e-08!54;UBERON:0002530!1.63e-07!59;UBERON:0000949!4.17e-07!45;UBERON:0005172!7.72e-07!55;UBERON:0005173!7.72e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.31e-66;19!UBERON:0006925;4.31e-66;19!UBERON:0002423;3.13e-50;25!UBERON:0002365;6.18e-39;31!UBERON:0002330;6.18e-39;31!UBERON:0002368;2.33e-34;33!UBERON:0000949;4.51e-25;43!UBERON:0005172;5.86e-15;52!UBERON:0005173;5.86e-15;52!UBERON:0002417;4.12e-13;58!UBERON:0000916;4.12e-13;58!UBERON:0002530;5.73e-13;57!UBERON:0001007;3.77e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.79e-66,19;UBERON:0006925,3.79e-66,19;UBERON:0008836,3.79e-66,19;UBERON:0008835,3.95e-57,22;UBERON:0003894,3.95e-57,22;UBERON:0009854,1.20e-54,23;UBERON:0007499,2.84e-50,25;UBERON:0009497,2.84e-50,25;UBERON:0000015,2.84e-50,25;UBERON:0002423,2.84e-50,25;UBERON:0006235,2.84e-50,25;UBERON:0004161,2.84e-50,25;UBERON:0009856,2.45e-48,26;UBERON:0002365,1.56e-40,31;UBERON:0002330,1.56e-40,31;UBERON:0002368,6.86e-36,35;UBERON:0000949,6.95e-28,45;UBERON:0003929,3.31e-23,54;UBERON:0005172,3.31e-23,54;UBERON:0005173,3.31e-23,54;UBERON:0002530,3.20e-21,59;UBERON:0002417,7.29e-21,60;UBERON:0000916,7.29e-21,60;UBERON:0005911,3.41e-15,82;UBERON:0001041,2.66e-14,87;UBERON:0005177,2.85e-12,101;UBERON:0009569,4.97e-11,112;UBERON:0003914,1.53e-10,117;UBERON:0004921,2.34e-10,118;UBERON:0005256,4.30e-10,122;UBERON:0001007,2.32e-08,145;UBERON:0001555,2.32e-08,145;UBERON:0007026,2.32e-08,145;UBERON:0000490,3.05e-08,148;UBERON:0000025,6.95e-08,192;UBERON:0001048,1.37e-07,160;UBERON:0003104,1.37e-07,160;UBERON:0009142,1.37e-07,160;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160 | |||
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| ||
|short_description=p5@ABCA1 | |short_description=p5@ABCA1 | ||
}} | }} |
Latest revision as of 23:06, 19 September 2015
Short description: | p5@ABCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -22bp_to_AB055982, AB445477_5end |
EntrezGene: | ABCA1 |
HGNC: | 29 |
UniProt: | O95477B7XCW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.57e-59 | 12 |
endodermal cell | 2.85e-12 | 58 |