FFCP PHASE1:Hg19::chrX:152486087..152486103,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6796 | |||
|TSSclassifier=strong | |||
|UniProt=P43355 | |||
|association_with_transcript=11bp_to_ENST00000356661_5end | |||
|cluster_id=chrX:152486087..152486103,- | |||
|coexpression_cluster_id=C4858 | |||
|description=CAGE_peak_2_at_MAGEA1_5end | |||
|id=chrX:152486087..152486103,- | |||
|ontology_enrichment_celltype=CL:0000062!3.36e-09!11;CL:0000375!3.36e-09!11;CL:0000335!3.36e-09!11;CL:0000054!3.65e-09!2;CL:0000137!3.65e-09!2;CL:0000092!3.65e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.31e-07,11;CL:0000375,1.31e-07,11;CL:0000335,1.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.31e-07;11 | |||
|ontology_enrichment_disease=DOID:162!6.31e-16!235;DOID:14566!2.04e-15!239;DOID:0050686!2.53e-13!137;DOID:1036!1.07e-12!8;DOID:200!3.65e-09!2;DOID:4305!3.65e-09!2;DOID:2531!1.70e-07!51;DOID:0060083!1.70e-07!51;DOID:0050687!2.72e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;8.13e-17;8!DOID:0060085;6.59e-10;1!DOID:3165;6.59e-10;1!DOID:0060121;6.59e-10;1!DOID:2438;6.59e-10;1!DOID:4418;6.59e-10;1!DOID:4960;1.20e-09;1!DOID:0070004;1.20e-09;1!DOID:8692;1.00e-06;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.96e-17,8;DOID:0060085,6.88e-10,1;DOID:3165,6.88e-10,1;DOID:0060121,6.88e-10,1;DOID:2438,6.88e-10,1;DOID:4418,6.88e-10,1;DOID:4960,1.15e-09,1;DOID:0070004,1.15e-09,1;DOID:162,1.71e-09,235;DOID:2531,2.20e-09,51;DOID:0060083,2.20e-09,51;DOID:0050686,2.36e-09,137;DOID:14566,3.16e-09,239;DOID:1240,3.44e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.35e-11;18!UBERON:0001282;2.26e-09;1!UBERON:0007195;2.26e-09;1!UBERON:0009842;2.26e-09;1!UBERON:0003704;2.26e-09;1!UBERON:0001171;2.26e-09;1!UBERON:0001172;2.26e-09;1!UBERON:0004765;5.66e-08;26!UBERON:0002371;9.33e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.08e-09,1;UBERON:0009842,2.08e-09,1;UBERON:0003704,2.08e-09,1;UBERON:0001171,2.08e-09,1;UBERON:0001172,2.08e-09,1;UBERON:0007195,2.67e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0871693560213,11.8813679885647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,10.6670108032685,0,0,6.57515967237122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,5.88267703002547,0,0,1.93701494939902,0,0,0,0,0,0,0,0,0,5.8654871760467,5.29368842657897,4.53118284834775,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,5.13096290148613,0,0,0,0,0,0,0,0,0,0,0,5.61871891051679,9.33958675004052,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.203790809934,0,0,0,0.25426853765475,0,0,0,0,6.97786426369381,0,0.453248366080503,0,0,0,0.13223260174269,0,0,0,0,0,0,11.8566979138767,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0.37494122388632,0,9.99128667407386,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,5.85530930846773,0,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,40.4580420758685,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.682008283964155,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0.573777643141411,0,0,7.5776415573178,0,0,0,0,0,0,0,0 | |||
|short_description=p2@MAGEA1 | |||
}} |
Latest revision as of 23:20, 19 September 2015
Short description: | p2@MAGEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAGEA1_5end |
Coexpression cluster: | C4858_small_large_melanoma_lymphangiectasia_Saos2_endometrial_fibrous |
Association with transcript: | 11bp_to_ENST00000356661_5end |
EntrezGene: | MAGEA1 |
HGNC: | 6796 |
UniProt: | P43355 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.31e-07 | 11 |
osteoprogenitor cell | 1.31e-07 | 11 |
mesenchyme condensation cell | 1.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.08e-09 | 1 |
acinus | 2.08e-09 | 1 |
intrahepatic bile duct | 2.08e-09 | 1 |
portal lobule | 2.08e-09 | 1 |
hepatic acinus | 2.08e-09 | 1 |
stroma of bone marrow | 2.67e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.96e-17 | 8 |
organ system benign neoplasm | 6.88e-10 | 1 |
skin benign neoplasm | 6.88e-10 | 1 |
integumentary system benign neoplasm | 6.88e-10 | 1 |
dermis tumor | 6.88e-10 | 1 |
cutaneous fibrous histiocytoma | 6.88e-10 | 1 |
bone marrow cancer | 1.15e-09 | 1 |
myeloma | 1.15e-09 | 1 |
cancer | 1.71e-09 | 235 |
hematologic cancer | 2.20e-09 | 51 |
immune system cancer | 2.20e-09 | 51 |
organ system cancer | 2.36e-09 | 137 |
disease of cellular proliferation | 3.16e-09 | 239 |
leukemia | 3.44e-07 | 39 |