FFCP PHASE1:Hg19::chr18:56247489..56247502,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:56247489..56247502,-
|short_description=p28@ALPK2
|description=CAGE_peak_28_at_ALPK2_5end
|association_with_transcript=-88bp_to_AK125243_5end
|EntrezGene...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_AK125243_5end | |||
|cluster_id=chr18:56247489..56247502,- | |||
|coexpression_cluster_id=C2468 | |||
|description=CAGE_peak_28_at_ALPK2_5end | |||
|id=chr18:56247489..56247502,- | |||
|ontology_enrichment_celltype=CL:0000128!4.28e-12!7;CL:0000126!4.28e-12!7;CL:0000127!4.28e-12!7;CL:0002453!4.28e-12!7;CL:0002620!1.15e-10!23;CL:0000243!7.33e-10!15;CL:0000125!7.33e-10!15;CL:0000030!7.33e-10!15;CL:0000339!7.33e-10!15;CL:0000095!1.30e-08!17;CL:0000123!1.30e-08!17;CL:0002605!2.41e-08!3;CL:0000133!2.91e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.74e-28;5!CL:0002605;1.96e-21;3!CL:0000228;2.25e-16;1!CL:0002372;2.25e-16;1!CL:0000990;3.79e-16;8!CL:0000451;2.50e-13;10!CL:0000128;9.52e-10;7!CL:0000126;9.52e-10;7!CL:0000127;9.52e-10;7!CL:0002097;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.44e-28,5;CL:0002605,2.41e-21,3;CL:0000228,1.93e-16,1;CL:0002372,1.93e-16,1;CL:0000990,3.42e-16,8;CL:0000451,2.30e-13,10;CL:0000128,1.04e-09,7;CL:0000126,1.04e-09,7;CL:0000127,1.04e-09,7;CL:0002453,1.04e-09,7;CL:0002097,4.70e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.43e-09;2!DOID:3910;5.08e-09;2!DOID:114;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.43e-09,2;DOID:3910,5.49e-09,2;DOID:114,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.62e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.08e-09;2!UBERON:0002173;5.08e-09;2!UBERON:0002186;5.08e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.49e-09,2;UBERON:0002173,5.49e-09,2;UBERON:0002186,5.49e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,2.28988789704845,0.821246550437305,2.63639543149086,0.458480434487708,0.738905305049512,0.629686250509434,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0.515281080091258,0,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.354920400119532,0,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,13.2928780652657,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.543616824294456,0.941425616810999,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,1.28767814440971,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,2.78774068787403,0,0,0.231522474323834,0,0,0,0,0,0,0,0.512483037175893,1.0362910251936,0,0,6.23552988286043,7.17470137692161,2.9441770966052,0.655219697692825,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,2.28988789704845,0.821246550437305,2.63639543149086,0.458480434487708,0.738905305049512,0.629686250509434,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0.515281080091258,0,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.354920400119532,0,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,13.2928780652657,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.543616824294456,0.941425616810999,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,1.28767814440971,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,2.78774068787403,0,0,0.231522474323834,0,0,0,0,0,0,0,0.512483037175893,1.0362910251936,0,0,6.23552988286043,7.17470137692161,2.9441770966052,0.655219697692825,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p28@ALPK2 | |||
}} | }} |
Latest revision as of 00:12, 20 September 2015
Short description: | p28@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -88bp_to_AK125243_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.44e-28 | 5 |
astrocyte of the cerebral cortex | 2.41e-21 | 3 |
multinucleate cell | 1.93e-16 | 1 |
myotube | 1.93e-16 | 1 |
conventional dendritic cell | 3.42e-16 | 8 |
dendritic cell | 2.30e-13 | 10 |
oligodendrocyte | 1.04e-09 | 7 |
macroglial cell | 1.04e-09 | 7 |
astrocyte | 1.04e-09 | 7 |
oligodendrocyte precursor cell | 1.04e-09 | 7 |
cortical cell of adrenal gland | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.49e-09 | 2 |
alveolar duct | 5.49e-09 | 2 |
bronchiole | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.43e-09 | 2 |
lung adenocarcinoma | 5.49e-09 | 2 |
heart disease | 8.09e-09 | 2 |