FFCP PHASE1:Hg19::chr11:71900572..71900600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2348 | |EntrezGene=2348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3791 | |HGNC=3791 | ||
|TSSclassifier=strong | |||
|UniProt=P15328 | |UniProt=P15328 | ||
|association_with_transcript=-1bp_to_ENST00000312293,NM_016724,NM_016725,uc001orz.1,uc001osa.1_5end | |association_with_transcript=-1bp_to_ENST00000312293,NM_016724,NM_016725,uc001orz.1,uc001osa.1_5end | ||
|cluster_id=chr11:71900572..71900600,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_5_at_FOLR1_5end | |description=CAGE_peak_5_at_FOLR1_5end | ||
|id=chr11:71900572..71900600,+ | |id=chr11:71900572..71900600,+ | ||
|ontology_enrichment_celltype=CL:0002149!6.64e-07!6;CL:0002255!6.64e-07!6 | |ontology_enrichment_celltype=CL:0002149!6.64e-07!6;CL:0002255!6.64e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.28e-21;3!CL:0000349;3.59e-12;19!CL:0000039;1.08e-09;7!CL:0000586;1.08e-09;7!CL:0002563;1.16e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.08e-21,3;CL:0000349,3.63e-12,19;CL:0000039,1.06e-09,7;CL:0000586,1.06e-09,7;CL:0002563,1.30e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.83e-08;1 | |||
|ontology_enrichment_disease=DOID:305!3.95e-11!106;DOID:0050687!7.03e-10!143;DOID:3001!6.64e-07!6 | |ontology_enrichment_disease=DOID:305!3.95e-11!106;DOID:0050687!7.03e-10!143;DOID:3001!6.64e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.12e-08;1!DOID:10165;2.12e-08;1!DOID:1798;2.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.91e-08,1;DOID:10165,1.91e-08,1;DOID:1798,1.91e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.07e-12!9;UBERON:0005631!1.72e-12!14;UBERON:0000158!1.72e-12!14;UBERON:0003124!9.10e-09!7;UBERON:0000062!1.59e-07!511;UBERON:0007023!6.80e-07!115 | |ontology_enrichment_uberon=UBERON:0001737!1.07e-12!9;UBERON:0005631!1.72e-12!14;UBERON:0000158!1.72e-12!14;UBERON:0003124!9.10e-09!7;UBERON:0000062!1.59e-07!511;UBERON:0007023!6.80e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.28e-21;3!UBERON:0000920;4.28e-21;3!UBERON:0005631;1.06e-16;10!UBERON:0000158;1.06e-16;10!UBERON:0000478;7.51e-13;24!UBERON:0001896;4.09e-10;3!UBERON:0005290;4.09e-10;3!UBERON:0002336;9.29e-08;1!UBERON:0011215;9.29e-08;1!UBERON:0001018;9.29e-08;1!UBERON:0002473;9.29e-08;1!UBERON:0005340;9.29e-08;1!UBERON:0003544;9.29e-08;1!UBERON:0005970;9.29e-08;1!UBERON:0002316;9.29e-08;1!UBERON:0001020;9.29e-08;1!UBERON:0002437;9.29e-08;1!UBERON:0001242;1.16e-07;4!UBERON:0001262;1.16e-07;4!UBERON:0004786;1.16e-07;4!UBERON:0004808;1.16e-07;4!UBERON:0001277;1.16e-07;4!UBERON:0001987;1.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,7.04e-24,7;UBERON:0005631,1.36e-22,14;UBERON:0000158,1.36e-22,14;UBERON:0000920,5.08e-21,3;UBERON:0000478,7.58e-13,24;UBERON:0001896,3.65e-10,3;UBERON:0005290,3.65e-10,3;UBERON:0010096,3.65e-10,3;UBERON:0002336,1.21e-07,1;UBERON:0011215,1.21e-07,1;UBERON:0001018,1.21e-07,1;UBERON:0002473,1.21e-07,1;UBERON:0005340,1.21e-07,1;UBERON:0003544,1.21e-07,1;UBERON:0005970,1.21e-07,1;UBERON:0002316,1.21e-07,1;UBERON:0001020,1.21e-07,1;UBERON:0002437,1.21e-07,1;UBERON:0001242,1.30e-07,4;UBERON:0001262,1.30e-07,4;UBERON:0004786,1.30e-07,4;UBERON:0004808,1.30e-07,4;UBERON:0001277,1.30e-07,4;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4;UBERON:0004923,8.75e-07,66 | |||
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| ||
|short_description=p5@FOLR1 | |short_description=p5@FOLR1 | ||
}} | }} |
Latest revision as of 00:41, 20 September 2015
Short description: | p5@FOLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOLR1_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -1bp_to_ENST00000312293, NM_016724, NM_016725, uc001orz.1, uc001osa.1_5end |
EntrezGene: | FOLR1 |
HGNC: | 3791 |
UniProt: | P15328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.08e-21 | 3 |
extraembryonic cell | 3.63e-12 | 19 |
germ line cell | 1.06e-09 | 7 |
germ cell | 1.06e-09 | 7 |
intestinal epithelial cell | 1.30e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chorion | 7.04e-24 | 7 |
extraembryonic membrane | 1.36e-22 | 14 |
membranous layer | 1.36e-22 | 14 |
egg chorion | 5.08e-21 | 3 |
extraembryonic structure | 7.58e-13 | 24 |
medulla oblongata | 3.65e-10 | 3 |
myelencephalon | 3.65e-10 | 3 |
future myelencephalon | 3.65e-10 | 3 |
corpus callosum | 1.21e-07 | 1 |
central nervous system cell part cluster | 1.21e-07 | 1 |
axon tract | 1.21e-07 | 1 |
intercerebral commissure | 1.21e-07 | 1 |
dorsal telencephalic commissure | 1.21e-07 | 1 |
brain white matter | 1.21e-07 | 1 |
brain commissure | 1.21e-07 | 1 |
white matter | 1.21e-07 | 1 |
nervous system commissure | 1.21e-07 | 1 |
cerebral hemisphere white matter | 1.21e-07 | 1 |
intestinal mucosa | 1.30e-07 | 4 |
wall of intestine | 1.30e-07 | 4 |
gastrointestinal system mucosa | 1.30e-07 | 4 |
gastrointestinal system epithelium | 1.30e-07 | 4 |
intestinal epithelium | 1.30e-07 | 4 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
organ component layer | 8.75e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.91e-08 | 1 |
endocrine pancreas cancer | 1.91e-08 | 1 |
pancreatic endocrine carcinoma | 1.91e-08 | 1 |