FFCP PHASE1:Hg19::chr10:95360526..95360579,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5950 | |EntrezGene=5950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9922 | |HGNC=9922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000471333_5end | |association_with_transcript=-40bp_to_ENST00000471333_5end | ||
|cluster_id=chr10:95360526..95360579,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_RBP4_5end | |description=CAGE_peak_5_at_RBP4_5end | ||
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|ontology_enrichment_celltype=CL:0000136!1.55e-11!15;CL:0000181!3.76e-09!12;CL:0000417!3.76e-09!12;CL:0000668!3.76e-09!12;CL:0000414!3.76e-09!12;CL:0000412!3.76e-09!12;CL:0000182!3.76e-09!12;CL:0000135!1.20e-07!3;CL:0000386!1.20e-07!3;CL:0000388!1.20e-07!3 | |ontology_enrichment_celltype=CL:0000136!1.55e-11!15;CL:0000181!3.76e-09!12;CL:0000417!3.76e-09!12;CL:0000668!3.76e-09!12;CL:0000414!3.76e-09!12;CL:0000412!3.76e-09!12;CL:0000182!3.76e-09!12;CL:0000135!1.20e-07!3;CL:0000386!1.20e-07!3;CL:0000388!1.20e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.90e-27;13!CL:0000182;4.95e-22;12!CL:0002521;8.26e-11;3 | |ontology_enrichment_celltype_v019=CL:0000136;5.90e-27;13!CL:0000182;4.95e-22;12!CL:0002521;8.26e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.30e-23,15;CL:0000182,4.44e-22,12;CL:0002521,6.29e-11,3;CL:0000223,4.02e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.57e-17;11!UBERON:0009497;3.10e-14;13 | |ontology_enrichment_development_v019=UBERON:0004161;7.57e-17;11!UBERON:0009497;3.10e-14;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.12e-24;19!UBERON:0006925;2.12e-24;19!UBERON:0002368;2.96e-19;33!UBERON:0002423;2.74e-18;25!UBERON:0000007;3.43e-16;2!UBERON:0002365;5.01e-14;31!UBERON:0002330;5.01e-14;31!UBERON:0000949;2.52e-12;43!UBERON:0002190;8.26e-11;3!UBERON:0003296;1.53e-08;4!UBERON:0010133;1.53e-08;4!UBERON:0002530;4.00e-08;57!UBERON:0002072;8.05e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.12e-24;19!UBERON:0006925;2.12e-24;19!UBERON:0002368;2.96e-19;33!UBERON:0002423;2.74e-18;25!UBERON:0000007;3.43e-16;2!UBERON:0002365;5.01e-14;31!UBERON:0002330;5.01e-14;31!UBERON:0000949;2.52e-12;43!UBERON:0002190;8.26e-11;3!UBERON:0003296;1.53e-08;4!UBERON:0010133;1.53e-08;4!UBERON:0002530;4.00e-08;57!UBERON:0002072;8.05e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.93e-24,19;UBERON:0006925,1.93e-24,19;UBERON:0008836,1.93e-24,19;UBERON:0008835,5.80e-21,22;UBERON:0003894,5.80e-21,22;UBERON:0009854,5.26e-20,23;UBERON:0002368,5.54e-20,35;UBERON:0007499,2.56e-18,25;UBERON:0009497,2.56e-18,25;UBERON:0000015,2.56e-18,25;UBERON:0002423,2.56e-18,25;UBERON:0006235,2.56e-18,25;UBERON:0004161,2.56e-18,25;UBERON:0009856,1.43e-17,26;UBERON:0000007,3.44e-16,2;UBERON:0000949,3.55e-15,45;UBERON:0002365,1.46e-14,31;UBERON:0002330,1.46e-14,31;UBERON:0002530,1.58e-13,59;UBERON:0003929,3.02e-12,54;UBERON:0002190,6.29e-11,3;UBERON:0002417,9.07e-09,60;UBERON:0000916,9.07e-09,60;UBERON:0003296,1.53e-08,4;UBERON:0010133,1.53e-08,4;UBERON:0005172,6.92e-08,54;UBERON:0005173,6.92e-08,54;UBERON:0005911,1.66e-07,82;UBERON:0002072,6.85e-07,5 | |||
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|short_description=p5@RBP4 | |short_description=p5@RBP4 | ||
}} | }} |
Latest revision as of 01:44, 20 September 2015
Short description: | p5@RBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBP4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -40bp_to_ENST00000471333_5end |
EntrezGene: | RBP4 |
HGNC: | 9922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.30e-23 | 15 |
hepatocyte | 4.44e-22 | 12 |
subcutaneous fat cell | 6.29e-11 | 3 |
endodermal cell | 4.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.93e-24 | 19 |
digestive gland | 1.93e-24 | 19 |
liver bud | 1.93e-24 | 19 |
hepatic diverticulum | 5.80e-21 | 22 |
liver primordium | 5.80e-21 | 22 |
digestive tract diverticulum | 5.26e-20 | 23 |
endocrine gland | 5.54e-20 | 35 |
epithelial sac | 2.56e-18 | 25 |
epithelium of foregut-midgut junction | 2.56e-18 | 25 |
anatomical boundary | 2.56e-18 | 25 |
hepatobiliary system | 2.56e-18 | 25 |
foregut-midgut junction | 2.56e-18 | 25 |
septum transversum | 2.56e-18 | 25 |
sac | 1.43e-17 | 26 |
pituitary gland | 3.44e-16 | 2 |
endocrine system | 3.55e-15 | 45 |
exocrine gland | 1.46e-14 | 31 |
exocrine system | 1.46e-14 | 31 |
gland | 1.58e-13 | 59 |
gut epithelium | 3.02e-12 | 54 |
subcutaneous adipose tissue | 6.29e-11 | 3 |
abdominal segment of trunk | 9.07e-09 | 60 |
abdomen | 9.07e-09 | 60 |
gland of diencephalon | 1.53e-08 | 4 |
neuroendocrine gland | 1.53e-08 | 4 |
abdomen element | 6.92e-08 | 54 |
abdominal segment element | 6.92e-08 | 54 |
endo-epithelium | 1.66e-07 | 82 |
hypodermis | 6.85e-07 | 5 |