FFCP PHASE1:Hg19::chr17:38652289..38652317,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84951 | |EntrezGene=84951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24352 | |HGNC=24352 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZW8 | |UniProt=Q8IZW8 | ||
|association_with_transcript=-2bp_to_BC018706_5end | |association_with_transcript=-2bp_to_BC018706_5end | ||
|cluster_id=chr17:38652289..38652317,- | |||
|coexpression_cluster_id=C436 | |||
|description=CAGE_peak_4_at_TNS4_5end | |description=CAGE_peak_4_at_TNS4_5end | ||
|id=chr17:38652289..38652317,- | |id=chr17:38652289..38652317,- | ||
|ontology_enrichment_celltype=CL:0000066!3.14e-28!254;CL:0002076!3.61e-26!43;CL:0000223!1.76e-19!59;CL:0002368!1.85e-17!13;CL:0002159!1.30e-14!13;CL:0000622!1.11e-10!5;CL:0002202!1.37e-10!9;CL:0002632!1.37e-10!9;CL:0002251!1.72e-10!21;CL:0000244!8.29e-09!4;CL:0000731!8.29e-09!4;CL:0000154!8.58e-09!6;CL:0000068!3.72e-07!3;CL:0000069!3.72e-07!3;CL:0000307!3.72e-07!3;CL:0000377!3.72e-07!3;CL:0002328!4.19e-07!3;CL:0000362!9.44e-07!8;CL:0002231!9.66e-07!3;CL:0002623!9.85e-07!3 | |ontology_enrichment_celltype=CL:0000066!3.14e-28!254;CL:0002076!3.61e-26!43;CL:0000223!1.76e-19!59;CL:0002368!1.85e-17!13;CL:0002159!1.30e-14!13;CL:0000622!1.11e-10!5;CL:0002202!1.37e-10!9;CL:0002632!1.37e-10!9;CL:0002251!1.72e-10!21;CL:0000244!8.29e-09!4;CL:0000731!8.29e-09!4;CL:0000154!8.58e-09!6;CL:0000068!3.72e-07!3;CL:0000069!3.72e-07!3;CL:0000307!3.72e-07!3;CL:0000377!3.72e-07!3;CL:0002328!4.19e-07!3;CL:0000362!9.44e-07!8;CL:0002231!9.66e-07!3;CL:0002623!9.85e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;9.42e-35;13!CL:0002076;2.28e-26;42!CL:0002159;3.55e-21;14!CL:0000244;6.01e-19;4!CL:0000731;6.01e-19;4!CL:0002202;1.37e-18;9!CL:0002632;1.37e-18;9!CL:0000622;4.81e-16;5!CL:0000307;4.21e-15;3!CL:0002328;7.82e-15;3!CL:0000362;1.05e-13;9!CL:0000154;2.18e-13;6!CL:0000240;3.24e-13;6!CL:0000311;3.24e-13;6!CL:0000079;3.24e-13;6!CL:0000237;3.24e-13;6!CL:0000317;2.51e-11;2!CL:1000448;2.51e-11;2!CL:0002308;2.51e-11;2!CL:0002140;2.51e-11;2!CL:0002327;3.33e-11;4!CL:0000575;1.23e-10;2!CL:0002536;3.11e-10;2!CL:0000312;2.24e-09;5!CL:0000150;6.05e-09;9!CL:0002077;6.28e-09;34!CL:0000349;3.65e-08;19!CL:0002251;5.39e-08;20!CL:0002231;1.13e-07;3!CL:0002623;3.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.47e-35,13;CL:0002076,1.31e-32,42;CL:0000223,1.89e-22,58;CL:0002159,2.91e-21,14;CL:0000066,8.19e-21,253;CL:0000244,4.23e-19,4;CL:0000731,4.23e-19,4;CL:0002202,1.07e-18,9;CL:0002632,1.07e-18,9;CL:0000622,4.55e-16,5;CL:0000068,4.12e-15,3;CL:0000069,4.12e-15,3;CL:0000307,4.12e-15,3;CL:0000377,4.12e-15,3;CL:0002328,5.48e-15,3;CL:0000362,9.57e-14,9;CL:0000154,2.08e-13,6;CL:0000240,3.24e-13,6;CL:0000311,3.24e-13,6;CL:0000079,3.24e-13,6;CL:0000237,3.24e-13,6;CL:0000036,3.24e-13,6;CL:0000357,3.24e-13,6;CL:0000114,3.24e-13,6;CL:0000317,2.45e-11,2;CL:1000448,2.45e-11,2;CL:0002308,2.45e-11,2;CL:0002140,2.45e-11,2;CL:0002327,3.77e-11,4;CL:0000575,1.06e-10,2;CL:0002536,2.29e-10,2;CL:0002077,5.60e-10,34;CL:0000312,2.05e-09,5;CL:0000150,5.87e-09,9;CL:0000349,3.46e-08,19;CL:0002251,5.83e-08,20;CL:0002321,9.28e-08,250;CL:0002231,1.22e-07,3;CL:0002623,2.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;4.21e-15;3!CL:0000357;3.24e-13;6!CL:0000114;3.24e-13;6!CL:0000223;1.12e-12;58 | |||
|ontology_enrichment_disease=DOID:305!7.87e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.30e-24!169;UBERON:0000925!1.30e-24!169;UBERON:0006595!1.30e-24!169;UBERON:0001004!2.90e-22!72;UBERON:0000077!2.89e-17!130;UBERON:0001007!1.04e-15!155;UBERON:0001555!1.04e-15!155;UBERON:0007026!1.04e-15!155;UBERON:0000065!1.97e-15!53;UBERON:0000161!2.49e-15!35;UBERON:0005631!1.02e-14!14;UBERON:0000158!1.02e-14!14;UBERON:0001737!1.12e-14!9;UBERON:0004921!1.32e-12!129;UBERON:0004185!1.32e-12!129;UBERON:0000072!3.39e-12!46;UBERON:0001041!6.14e-12!98;UBERON:0008947!2.13e-11!38;UBERON:0003258!2.13e-11!38;UBERON:0001557!8.11e-11!19;UBERON:0000166!2.90e-10!21;UBERON:0000365!4.41e-10!5;UBERON:0007196!4.50e-10!14;UBERON:0001558!4.50e-10!14;UBERON:0003124!1.97e-09!7;UBERON:0003102!1.24e-08!95;UBERON:0000165!2.02e-08!28;UBERON:0000930!2.02e-08!28;UBERON:0005910!2.64e-08!6;UBERON:0001044!5.16e-08!6;UBERON:0003293!5.16e-08!6;UBERON:0003294!5.16e-08!6;UBERON:0010047!5.16e-08!6;UBERON:0000167!5.16e-08!6;UBERON:0005911!9.97e-08!82;UBERON:0000478!1.88e-07!24;UBERON:0002530!2.86e-07!59;UBERON:0000062!3.70e-07!511;UBERON:0004815!4.19e-07!3;UBERON:0002031!4.19e-07!3;UBERON:0000305!5.18e-07!7;UBERON:0003126!5.52e-07!7;UBERON:0001005!5.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.42e-15;5!UBERON:0004815;7.82e-15;3!UBERON:0002031;7.82e-15;3!UBERON:0005910;1.10e-12;6!UBERON:0005631;2.08e-11;10!UBERON:0000158;2.08e-11;10!UBERON:0002419;2.51e-11;2!UBERON:0007771;2.51e-11;2!UBERON:0003297;2.51e-11;2!UBERON:0001821;2.51e-11;2!UBERON:0003487;2.51e-11;2!UBERON:0001820;2.51e-11;2!UBERON:0001911;3.33e-11;4!UBERON:0000065;5.75e-11;44!UBERON:0007196;6.50e-11;15!UBERON:0001558;6.50e-11;15!UBERON:0000305;8.73e-11;7!UBERON:0000486;1.88e-09;12!UBERON:0002185;4.32e-09;5!UBERON:0001003;4.28e-08;15!UBERON:0007376;4.28e-08;15!UBERON:0001004;4.97e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.59e-15,5;UBERON:0004815,5.48e-15,3;UBERON:0002031,5.48e-15,3;UBERON:0001004,2.67e-14,74;UBERON:0004119,9.39e-14,160;UBERON:0000925,9.39e-14,160;UBERON:0006595,9.39e-14,160;UBERON:0005910,8.78e-13,6;UBERON:0000065,7.84e-12,54;UBERON:0002419,2.45e-11,2;UBERON:0007771,2.45e-11,2;UBERON:0003297,2.45e-11,2;UBERON:0001821,2.45e-11,2;UBERON:0003487,2.45e-11,2;UBERON:0001820,2.45e-11,2;UBERON:0005089,2.45e-11,2;UBERON:0005088,2.45e-11,2;UBERON:0005631,2.54e-11,14;UBERON:0000158,2.54e-11,14;UBERON:0001911,3.77e-11,4;UBERON:0005333,3.77e-11,4;UBERON:0008425,3.77e-11,4;UBERON:0005311,3.77e-11,4;UBERON:0007196,5.63e-11,15;UBERON:0001558,5.63e-11,15;UBERON:0000305,6.64e-11,7;UBERON:0004871,1.49e-09,8;UBERON:0002185,3.51e-09,5;UBERON:0003102,8.17e-09,99;UBERON:0005157,2.48e-08,47;UBERON:0001003,4.06e-08,15;UBERON:0007376,4.06e-08,15;UBERON:0007383,4.06e-08,15;UBERON:0005153,4.68e-07,37;UBERON:0005085,9.31e-07,31 | |||
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| ||
|short_description=p4@TNS4 | |short_description=p4@TNS4 | ||
}} | }} |
Latest revision as of 02:16, 20 September 2015
Short description: | p4@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNS4_5end |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | -2bp_to_BC018706_5end |
EntrezGene: | TNS4 |
HGNC: | 24352 |
UniProt: | Q8IZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 2.59e-15 | 5 |
lower respiratory tract epithelium | 5.48e-15 | 3 |
epithelium of bronchus | 5.48e-15 | 3 |
respiratory system | 2.67e-14 | 74 |
endoderm-derived structure | 9.39e-14 | 160 |
endoderm | 9.39e-14 | 160 |
presumptive endoderm | 9.39e-14 | 160 |
transitional epithelium | 8.78e-13 | 6 |
respiratory tract | 7.84e-12 | 54 |
skin gland | 2.45e-11 | 2 |
epidermis gland | 2.45e-11 | 2 |
gland of integumental system | 2.45e-11 | 2 |
sebaceous gland | 2.45e-11 | 2 |
skin sebaceous gland | 2.45e-11 | 2 |
sweat gland | 2.45e-11 | 2 |
sweat gland placode | 2.45e-11 | 2 |
sebaceous gland placode | 2.45e-11 | 2 |
extraembryonic membrane | 2.54e-11 | 14 |
membranous layer | 2.54e-11 | 14 |
mammary gland | 3.77e-11 | 4 |
mammary bud | 3.77e-11 | 4 |
mammary ridge | 3.77e-11 | 4 |
mammary placode | 3.77e-11 | 4 |
tracheobronchial tree | 5.63e-11 | 15 |
lower respiratory tract | 5.63e-11 | 15 |
amnion | 6.64e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.49e-09 | 8 |
bronchus | 3.51e-09 | 5 |
surface structure | 8.17e-09 | 99 |
epithelial fold | 2.48e-08 | 47 |
skin epidermis | 4.06e-08 | 15 |
outer epithelium | 4.06e-08 | 15 |
enveloping layer of ectoderm | 4.06e-08 | 15 |
epithelial bud | 4.68e-07 | 37 |
ectodermal placode | 9.31e-07 | 31 |