FFCP PHASE1:Hg19::chr19:56048460..56048482,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34416 | |||
|TSSclassifier=strong | |||
|UniProt=P0C263 | |||
|association_with_transcript=-4bp_to_ENST00000413299_5end | |||
|cluster_id=chr19:56048460..56048482,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_1_at_SBK2_5end | |||
|id=chr19:56048460..56048482,- | |||
|ontology_enrichment_celltype=CL:0000188!7.23e-13!9;CL:0002322!4.01e-10!5;CL:1000507!7.62e-07!12;CL:1000494!7.62e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.46e-15;5!CL:0000188;2.23e-13;9!CL:0000669;9.87e-12;4!CL:0000650;6.67e-11;2!CL:1000500;6.67e-11;2!CL:1000618;6.67e-11;2!CL:1001318;6.67e-11;2!CL:0002173;6.67e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.91e-15,5;CL:0000188,2.65e-13,9;CL:0000669,8.54e-12,4;CL:0000650,5.75e-11,2;CL:1000500,5.75e-11,2;CL:1000618,5.75e-11,2;CL:1001318,5.75e-11,2;CL:0002173,5.75e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!3.71e-10!69;UBERON:0002113!3.13e-08!27;UBERON:0003918!3.13e-08!27;UBERON:0005095!3.13e-08!27;UBERON:0007687!3.13e-08!27;UBERON:0004151!5.96e-07!3;UBERON:0009773!7.62e-07!12;UBERON:0001231!7.62e-07!12;UBERON:0004810!7.62e-07!12;UBERON:0005172!8.39e-07!55;UBERON:0005173!8.39e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.99e-14;16!UBERON:0002036;6.99e-14;16!UBERON:0003567;6.67e-11;2!UBERON:0003838;6.67e-11;2!UBERON:0003586;6.67e-11;2!UBERON:0005169;6.67e-11;2!UBERON:0002321;6.67e-11;2!UBERON:0005215;6.67e-11;2!UBERON:0002303;6.67e-11;2!UBERON:0002319;6.67e-11;2!UBERON:0000341;1.06e-10;2!UBERON:0001723;1.07e-07;3!UBERON:0001033;1.07e-07;3!UBERON:0004151;1.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,5.75e-11,2;UBERON:0003838,5.75e-11,2;UBERON:0003586,5.75e-11,2;UBERON:0005169,5.75e-11,2;UBERON:0002321,5.75e-11,2;UBERON:0005215,5.75e-11,2;UBERON:0002303,5.75e-11,2;UBERON:0002319,5.75e-11,2;UBERON:0000341,1.09e-10,2;UBERON:0003103,5.92e-08,68;UBERON:0001723,1.11e-07,3;UBERON:0004151,1.11e-07,3;UBERON:0001033,1.11e-07,3;UBERON:0010056,1.11e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,1.59035721985782,2.09149097165133,0.829288440122964,1.7662459561294,1.09493207722749,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77457766191941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,1.56869953835371,0,0.105551628892876,0,0,0,0,2.98041081298238,6.52196706011309,0,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,4.8335359146061,0.616194468458578,1.07452572308291,4.41077031950498,0.214840489736547,0.290033387828457,2.13066568540252,3.65031346151623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0.699679999969566,0,0,0,0,0,0,0.694499979733169,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.20390222730132,0,0,0,0.387956065953678,142.445388480081,3.84167259326905,0,0,0,0,0,0,0.799238438328521,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,47.4780082162832,0,0.717873024576814,0.599037001496973,0.429226048136571,3.34757186162809,4.16537529417703,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.321506296930038,0.825236619583403,1.24632101408756,0,0,0.0607495566580247,0,0.0788057072991982,0.681909645754975,0,0.179287339332845,0,69.3254466582166,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,7.60917492149269,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,5.60038870528415,0,0,0,0,13.7242618479952,0,0,0,0,0,2.16161013012681,0.657852148736121,0,10.4173580666294,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,1.02662806856247,2.3196288626764,0.971421986118279,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.469919589899268,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0.371995018166751,0,0,1.7663299476911,0.655593431782173,24.5795091962188,1.01988829741982,0.26721740526556,2.48116228744081,0,0,0,0,0,8.10289131223727,1.1903221573187,0,0,0,0.700118741059814,0,22.2071082854901,3.42233301085281,0.875576689189638,0.0717222053926763,1.99596213927608,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p1@SBK2 | |||
}} |
Latest revision as of 02:23, 20 September 2015
Short description: | p1@SBK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SBK2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -4bp_to_ENST00000413299_5end |
EntrezGene: | SBK2 |
HGNC: | 34416 |
UniProt: | P0C263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.91e-15 | 5 |
cell of skeletal muscle | 2.65e-13 | 9 |
pericyte cell | 8.54e-12 | 4 |
mesangial cell | 5.75e-11 | 2 |
kidney interstitial cell | 5.75e-11 | 2 |
juxtaglomerular complex cell | 5.75e-11 | 2 |
renal interstitial pericyte | 5.75e-11 | 2 |
extraglomerular mesangial cell | 5.75e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 5.75e-11 | 2 |
abdominal segment connective tissue | 5.75e-11 | 2 |
trunk connective tissue | 5.75e-11 | 2 |
interstitial tissue | 5.75e-11 | 2 |
extraglomerular mesangium | 5.75e-11 | 2 |
kidney interstitium | 5.75e-11 | 2 |
juxtaglomerular apparatus | 5.75e-11 | 2 |
mesangium | 5.75e-11 | 2 |
throat | 1.09e-10 | 2 |
compound organ | 5.92e-08 | 68 |
tongue | 1.11e-07 | 3 |
cardiac chamber | 1.11e-07 | 3 |
gustatory system | 1.11e-07 | 3 |
future tongue | 1.11e-07 | 3 |