FFCP PHASE1:Hg19::chr22:37215541..37215544,-: Difference between revisions
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|id=chr22:37215541..37215544,-
|short_description=p3@PVALB
|description=CAGE_peak_3_at_PVALB_5end
|association_with_transcript=-18bp_to_ENST00000216200_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5816 | |EntrezGene=5816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9704 | |HGNC=9704 | ||
|TSSclassifier=strong | |||
|UniProt=P20472 | |UniProt=P20472 | ||
|association_with_transcript=-18bp_to_ENST00000216200_5end | |||
|cluster_id=chr22:37215541..37215544,- | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_3_at_PVALB_5end | |||
|id=chr22:37215541..37215544,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.01e-24;3!UBERON:0000358;3.57e-19;1!UBERON:0004874;5.62e-19;1 | |||
|ontology_enrichment_disease=DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!4.45e-16!2;UBERON:0000974!9.39e-12!10;UBERON:0008814!1.00e-11!15;UBERON:0001042!1.35e-11!10;UBERON:0009145!1.35e-11!10;UBERON:0007023!5.58e-11!115;UBERON:0001723!9.56e-11!3;UBERON:0001033!9.56e-11!3;UBERON:0010056!9.56e-11!3;UBERON:0006562!1.48e-10!11;UBERON:0004733!9.94e-10!12;UBERON:0002028!9.94e-10!12;UBERON:0007277!9.94e-10!12;UBERON:0004732!5.44e-09!13;UBERON:0007029!1.02e-08!1;UBERON:0000989!1.18e-08!1;UBERON:0008811!1.18e-08!1;UBERON:0006258!1.18e-08!1;UBERON:0005876!1.18e-08!1;UBERON:0004874!1.18e-08!1;UBERON:0002902!3.53e-08!1;UBERON:0009899!3.53e-08!1;UBERON:0000153!5.39e-08!129;UBERON:0007811!5.39e-08!129;UBERON:0002370!7.72e-08!4;UBERON:0005058!7.72e-08!4;UBERON:0009113!7.72e-08!4;UBERON:0003295!7.72e-08!4;UBERON:0005562!7.72e-08!4;UBERON:0003076!8.30e-08!15;UBERON:0003057!8.30e-08!15;UBERON:0002680!9.36e-08!9;UBERON:0001895!9.36e-08!9;UBERON:0010092!9.36e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.73e-37;2!UBERON:0007029;3.57e-19;1!UBERON:0000989;5.62e-19;1!UBERON:0008811;5.62e-19;1!UBERON:0000974;3.77e-13;6!UBERON:0002037;6.90e-13;6!UBERON:0003127;1.43e-10;2!UBERON:0002680;6.61e-09;9!UBERON:0001895;6.61e-09;9!UBERON:0000922;1.64e-07;49!UBERON:0001723;2.47e-07;3!UBERON:0001033;2.47e-07;3!UBERON:0004733;6.74e-07;12!UBERON:0002028;6.74e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.73e-37,2;UBERON:0007029,3.91e-19,1;UBERON:0000989,5.62e-19,1;UBERON:0008811,5.62e-19,1;UBERON:0006258,5.62e-19,1;UBERON:0005876,5.62e-19,1;UBERON:0004874,5.62e-19,1;UBERON:0002037,6.12e-13,6;UBERON:0006215,6.12e-13,6;UBERON:0003127,1.43e-10,2;UBERON:0002680,6.11e-09,9;UBERON:0001895,6.11e-09,9;UBERON:0010092,6.11e-09,9;UBERON:0000974,2.92e-08,10;UBERON:0001723,2.47e-07,3;UBERON:0001033,2.47e-07,3;UBERON:0010056,2.47e-07,3;UBERON:0004733,6.35e-07,12;UBERON:0002028,6.35e-07,12;UBERON:0007277,6.35e-07,12 | |||
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|short_description=p3@PVALB | |||
}} | }} |
Latest revision as of 03:12, 20 September 2015
Short description: | p3@PVALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PVALB_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | -18bp_to_ENST00000216200_5end |
EntrezGene: | PVALB |
HGNC: | 9704 |
UniProt: | P20472 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 2.73e-37 | 2 |
surface | 3.91e-19 | 1 |
penis | 5.62e-19 | 1 |
intromittent organ | 5.62e-19 | 1 |
lateral plate mesenchyme | 5.62e-19 | 1 |
undifferentiated genital tubercle | 5.62e-19 | 1 |
somatopleure | 5.62e-19 | 1 |
cerebellum | 6.12e-13 | 6 |
rhombic lip | 6.12e-13 | 6 |
open tracheal system trachea | 1.43e-10 | 2 |
regional part of metencephalon | 6.11e-09 | 9 |
metencephalon | 6.11e-09 | 9 |
future metencephalon | 6.11e-09 | 9 |
neck | 2.92e-08 | 10 |
tongue | 2.47e-07 | 3 |
gustatory system | 2.47e-07 | 3 |
future tongue | 2.47e-07 | 3 |
segmental subdivision of hindbrain | 6.35e-07 | 12 |
hindbrain | 6.35e-07 | 12 |
presumptive hindbrain | 6.35e-07 | 12 |