FFCP PHASE1:Hg19::chr19:56652643..56652683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55311 | |EntrezGene=55311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16052 | |HGNC=16052 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0Y2 | |UniProt=Q8N0Y2 | ||
|association_with_transcript=87bp_to_ENST00000337080,uc002qmm.2,uc002qmn.1_5end | |association_with_transcript=87bp_to_ENST00000337080,uc002qmm.2,uc002qmn.1_5end | ||
|cluster_id=chr19:56652643..56652683,+ | |||
|description=CAGE_peak_1_at_ZNF444_5end | |description=CAGE_peak_1_at_ZNF444_5end | ||
|id=chr19:56652643..56652683,+ | |id=chr19:56652643..56652683,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.36e-17!254;CL:0002321!4.01e-10!248;CL:0000220!7.23e-10!246;CL:1000449!1.60e-07!16;CL:0002078!3.97e-07!44 | |ontology_enrichment_celltype=CL:0000066!9.36e-17!254;CL:0002321!4.01e-10!248;CL:0000220!7.23e-10!246;CL:1000449!1.60e-07!16;CL:0002078!3.97e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:1000449;6.31e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.98e-17,253;CL:0002321,1.97e-10,250;CL:1000449,5.22e-08,15;CL:0002078,1.63e-07,45;CL:0000115,4.37e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.62e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.88e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000119!4.34e-13!312;UBERON:0000483!1.77e-12!309;UBERON:0003914!7.33e-09!118;UBERON:0000481!3.56e-08!347;UBERON:0000490!4.03e-08!138;UBERON:0005172!9.36e-08!55;UBERON:0005173!9.36e-08!55;UBERON:0001048!1.15e-07!168;UBERON:0004211!1.60e-07!16;UBERON:0001285!1.60e-07!16;UBERON:0007684!1.60e-07!16;UBERON:0003220!1.60e-07!16;UBERON:0004208!1.60e-07!16;UBERON:0000025!3.30e-07!194;UBERON:0005177!5.43e-07!107;UBERON:0006555!5.58e-07!17;UBERON:0005103!5.58e-07!17;UBERON:0000083!5.58e-07!17;UBERON:0009201!5.58e-07!17;UBERON:0004819!5.58e-07!17;UBERON:0006553!5.58e-07!17;UBERON:0003074!5.58e-07!17;UBERON:0003060!5.58e-07!17;UBERON:0005256!8.79e-07!143;UBERON:0005911!9.14e-07!82;UBERON:0000466!9.76e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.31e-08;15!UBERON:0004819;6.31e-08;15!UBERON:0001285;6.31e-08;15!UBERON:0007684;6.31e-08;15!UBERON:0000353;3.13e-07;15!UBERON:0000490;4.23e-07;33!UBERON:0001851;7.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.03e-12,309;UBERON:0000483,4.12e-12,306;UBERON:0000490,1.50e-09,148;UBERON:0003914,5.62e-09,117;UBERON:0005177,3.56e-08,101;UBERON:0004211,5.22e-08,15;UBERON:0009773,5.22e-08,15;UBERON:0001231,5.22e-08,15;UBERON:0001285,5.22e-08,15;UBERON:0007684,5.22e-08,15;UBERON:0004208,5.22e-08,15;UBERON:0005172,7.10e-08,54;UBERON:0005173,7.10e-08,54;UBERON:0006555,2.11e-07,16;UBERON:0004819,2.11e-07,16;UBERON:0000025,2.45e-07,192;UBERON:0000353,4.00e-07,15;UBERON:0001048,5.01e-07,160;UBERON:0006554,5.80e-07,47;UBERON:0001851,6.76e-07,15;UBERON:0002100,7.76e-07,199;UBERON:0005911,9.10e-07,82 | |||
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| ||
|short_description=p1@ZNF444 | |short_description=p1@ZNF444 | ||
}} | }} |
Latest revision as of 03:37, 20 September 2015
Short description: | p1@ZNF444 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF444_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_ENST00000337080, uc002qmm.2, uc002qmn.1_5end |
EntrezGene: | ZNF444 |
HGNC: | 16052 |
UniProt: | Q8N0Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.98e-17 | 253 |
embryonic cell | 1.97e-10 | 250 |
epithelial cell of nephron | 5.22e-08 | 15 |
meso-epithelial cell | 1.63e-07 | 45 |
endothelial cell | 4.37e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.03e-12 | 309 |
epithelium | 4.12e-12 | 306 |
unilaminar epithelium | 1.50e-09 | 148 |
epithelial tube | 5.62e-09 | 117 |
trunk region element | 3.56e-08 | 101 |
nephron epithelium | 5.22e-08 | 15 |
renal tubule | 5.22e-08 | 15 |
nephron tubule | 5.22e-08 | 15 |
nephron | 5.22e-08 | 15 |
uriniferous tubule | 5.22e-08 | 15 |
nephrogenic mesenchyme | 5.22e-08 | 15 |
abdomen element | 7.10e-08 | 54 |
abdominal segment element | 7.10e-08 | 54 |
excretory tube | 2.11e-07 | 16 |
kidney epithelium | 2.11e-07 | 16 |
tube | 2.45e-07 | 192 |
parenchyma | 4.00e-07 | 15 |
primordium | 5.01e-07 | 160 |
urinary system structure | 5.80e-07 | 47 |
cortex | 6.76e-07 | 15 |
trunk | 7.76e-07 | 199 |
endo-epithelium | 9.10e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.88e-08 | 235 |