FFCP PHASE1:Hg19::chr7:94293862..94293872,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23089 | |EntrezGene=23089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14005 | |HGNC=14005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_ENST00000465184_5end | |association_with_transcript=-174bp_to_ENST00000465184_5end | ||
|cluster_id=chr7:94293862..94293872,+ | |||
|coexpression_cluster_id=C340 | |coexpression_cluster_id=C340 | ||
|description=CAGE_peak_24_at_PEG10_5end | |description=CAGE_peak_24_at_PEG10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.69e-14;12!CL:0000047;2.72e-10;2 | |ontology_enrichment_celltype_v019=CL:0000182;3.69e-14;12!CL:0000047;2.72e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.20e-15;11!UBERON:0009497;4.02e-13;13!UBERON:0003104;1.28e-09;31 | |ontology_enrichment_development_v019=UBERON:0004161;2.20e-15;11!UBERON:0009497;4.02e-13;13!UBERON:0003104;1.28e-09;31 | ||
|ontology_enrichment_disease=DOID:0050687!1.44e-10!143;DOID:305!1.20e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.44e-10!143;DOID:305!1.20e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:12603;3.25e-19;1 | |ontology_enrichment_disease_v019=DOID:12603;3.25e-19;1 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,5.62e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.43e-13!82;UBERON:0005743!2.89e-12!86;UBERON:0001049!7.58e-12!57;UBERON:0005068!7.58e-12!57;UBERON:0006241!7.58e-12!57;UBERON:0007135!7.58e-12!57;UBERON:0002616!3.68e-11!59;UBERON:0000073!5.93e-11!94;UBERON:0001016!5.93e-11!94;UBERON:0000955!8.59e-11!69;UBERON:0006238!8.59e-11!69;UBERON:0002780!1.07e-09!41;UBERON:0001890!1.07e-09!41;UBERON:0006240!1.07e-09!41;UBERON:0003080!2.42e-09!42;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001893!1.25e-08!34;UBERON:0001869!2.71e-08!32;UBERON:0002346!3.13e-08!90;UBERON:0002791!5.11e-08!33;UBERON:0009663!1.93e-07!7;UBERON:0002308!2.49e-07!9;UBERON:0000125!2.49e-07!9;UBERON:0003075!7.72e-07!86;UBERON:0007284!7.72e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!2.43e-13!82;UBERON:0005743!2.89e-12!86;UBERON:0001049!7.58e-12!57;UBERON:0005068!7.58e-12!57;UBERON:0006241!7.58e-12!57;UBERON:0007135!7.58e-12!57;UBERON:0002616!3.68e-11!59;UBERON:0000073!5.93e-11!94;UBERON:0001016!5.93e-11!94;UBERON:0000955!8.59e-11!69;UBERON:0006238!8.59e-11!69;UBERON:0002780!1.07e-09!41;UBERON:0001890!1.07e-09!41;UBERON:0006240!1.07e-09!41;UBERON:0003080!2.42e-09!42;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001893!1.25e-08!34;UBERON:0001869!2.71e-08!32;UBERON:0002346!3.13e-08!90;UBERON:0002791!5.11e-08!33;UBERON:0009663!1.93e-07!7;UBERON:0002308!2.49e-07!9;UBERON:0000125!2.49e-07!9;UBERON:0003075!7.72e-07!86;UBERON:0007284!7.72e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.73e-37;2!UBERON:0001874;3.25e-19;1!UBERON:0003296;4.29e-19;4!UBERON:0010133;4.29e-19;4!UBERON:0002368;1.11e-12;33!UBERON:0001894;2.42e-11;7!UBERON:0002107;3.57e-09;19!UBERON:0006925;3.57e-09;19!UBERON:0000949;5.91e-08;43!UBERON:0005383;2.79e-07;3!UBERON:0005382;2.79e-07;3!UBERON:0002423;4.18e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000007;4.73e-37;2!UBERON:0001874;3.25e-19;1!UBERON:0003296;4.29e-19;4!UBERON:0010133;4.29e-19;4!UBERON:0002368;1.11e-12;33!UBERON:0001894;2.42e-11;7!UBERON:0002107;3.57e-09;19!UBERON:0006925;3.57e-09;19!UBERON:0000949;5.91e-08;43!UBERON:0005383;2.79e-07;3!UBERON:0005382;2.79e-07;3!UBERON:0002423;4.18e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.28e-37,2;UBERON:0001874,3.25e-19,1;UBERON:0003296,3.57e-19,4;UBERON:0010133,3.57e-19,4;UBERON:0002368,4.67e-13,35;UBERON:0001894,2.18e-11,7;UBERON:0006222,2.18e-11,7;UBERON:0000949,3.57e-10,45;UBERON:0002107,3.24e-09,19;UBERON:0006925,3.24e-09,19;UBERON:0008836,3.24e-09,19;UBERON:0008835,4.89e-08,22;UBERON:0003894,4.89e-08,22;UBERON:0002530,9.12e-08,59;UBERON:0009854,1.04e-07,23;UBERON:0005383,2.79e-07,3;UBERON:0005382,2.79e-07,3;UBERON:0002780,3.42e-07,41;UBERON:0001890,3.42e-07,41;UBERON:0003080,3.42e-07,41;UBERON:0006240,3.42e-07,41;UBERON:0007499,3.88e-07,25;UBERON:0009497,3.88e-07,25;UBERON:0000015,3.88e-07,25;UBERON:0002423,3.88e-07,25;UBERON:0006235,3.88e-07,25;UBERON:0004161,3.88e-07,25;UBERON:0009856,6.97e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.298897361103602,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0.437299999980979,0,0.341380344856499,0,0.236387681767936,0,0.583209226766509,0.520874984799877,0.885741385813839,0.120596438625408,0,0.331737779793674,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,1.22429104652196,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89079637537337,2.39005989305383,1.55028150864625,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0,0,0.332787154610557,0.0620964029413835,0,0.124980407962107,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.756215088665154,0,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0.527613733078862,0.255524855279191,0,0,3.03482802118316,1.59363533945908,0.79832133146375,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,1.41404030924402,0,0,0.431855182437243,0.47775168788705,0,0.316027223465453,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,4.6392577253528,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,2.82190377816914,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0.151557396436479,0,0,0.103432995861895,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0.960546112899439,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.298897361103602,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0.437299999980979,0,0.341380344856499,0,0.236387681767936,0,0.583209226766509,0.520874984799877,0.885741385813839,0.120596438625408,0,0.331737779793674,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,1.22429104652196,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89079637537337,2.39005989305383,1.55028150864625,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0,0,0.332787154610557,0.0620964029413835,0,0.124980407962107,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.756215088665154,0,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0.527613733078862,0.255524855279191,0,0,3.03482802118316,1.59363533945908,0.79832133146375,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,1.41404030924402,0,0,0.431855182437243,0.47775168788705,0,0.316027223465453,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,4.6392577253528,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,2.82190377816914,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0.151557396436479,0,0,0.103432995861895,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0.960546112899439,0,0,0,0,0,0,0,0 | ||
|short_description=p24@PEG10 | |short_description=p24@PEG10 | ||
}} | }} |
Latest revision as of 03:57, 20 September 2015
Short description: | p24@PEG10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PEG10_5end |
Coexpression cluster: | C340_hepatocellular_skeletal_breast_putamen_mucinous_pituitary_hepatoblastoma |
Association with transcript: | -174bp_to_ENST00000465184_5end |
EntrezGene: | PEG10 |
HGNC: | 14005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.15e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.28e-37 | 2 |
putamen | 3.25e-19 | 1 |
gland of diencephalon | 3.57e-19 | 4 |
neuroendocrine gland | 3.57e-19 | 4 |
endocrine gland | 4.67e-13 | 35 |
diencephalon | 2.18e-11 | 7 |
future diencephalon | 2.18e-11 | 7 |
endocrine system | 3.57e-10 | 45 |
liver | 3.24e-09 | 19 |
digestive gland | 3.24e-09 | 19 |
liver bud | 3.24e-09 | 19 |
hepatic diverticulum | 4.89e-08 | 22 |
liver primordium | 4.89e-08 | 22 |
gland | 9.12e-08 | 59 |
digestive tract diverticulum | 1.04e-07 | 23 |
caudate-putamen | 2.79e-07 | 3 |
dorsal striatum | 2.79e-07 | 3 |
regional part of forebrain | 3.42e-07 | 41 |
forebrain | 3.42e-07 | 41 |
anterior neural tube | 3.42e-07 | 41 |
future forebrain | 3.42e-07 | 41 |
epithelial sac | 3.88e-07 | 25 |
epithelium of foregut-midgut junction | 3.88e-07 | 25 |
anatomical boundary | 3.88e-07 | 25 |
hepatobiliary system | 3.88e-07 | 25 |
foregut-midgut junction | 3.88e-07 | 25 |
septum transversum | 3.88e-07 | 25 |
sac | 6.97e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.62e-19 | 1 |