FFCP PHASE1:Hg19::chrX:153991004..153991024,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:153991004..153991024,+ to FFCP PHASE1:Hg19::chrX:153991004..153991024,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1736 | |EntrezGene=1736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2890 | |HGNC=2890 | ||
|TSSclassifier=strong | |||
|UniProt=O60832 | |UniProt=O60832 | ||
|association_with_transcript=-6bp_to_ENST00000369550,NM_001142463,NM_001363,uc004fmm.2,uc010nvf.2_5end | |||
|cluster_id=chrX:153991004..153991024,+ | |||
|description=CAGE_peak_4_at_DKC1_5end | |||
|id=chrX:153991004..153991024,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.70e-18!52;CL:0000542!1.73e-18!53;CL:0000051!1.73e-18!53;CL:0000037!3.54e-17!172;CL:0000566!3.54e-17!172;CL:0000738!5.38e-16!140;CL:0000988!7.57e-15!182;CL:0002032!9.28e-15!165;CL:0000837!9.28e-15!165;CL:0002031!4.33e-14!124;CL:0002087!2.84e-13!119;CL:0000791!2.30e-10!18;CL:0000789!2.30e-10!18;CL:0002420!2.30e-10!18;CL:0002419!2.30e-10!18;CL:0000790!2.30e-10!18;CL:0000084!3.17e-10!25;CL:0000827!3.17e-10!25;CL:0000236!4.23e-08!14;CL:0000945!5.93e-08!24;CL:0000826!5.93e-08!24;CL:0000625!1.70e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.23e-12;53!CL:0000084;9.65e-11;25!CL:0000791;1.05e-10;18!CL:0000789;1.05e-10;18!CL:0002419;1.05e-10;18!CL:0000236;3.21e-08;13!CL:0000945;6.03e-08;24!CL:0000625;8.22e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.64e-19,52;CL:0000542,6.74e-19,53;CL:0000051,6.74e-19,53;CL:0000037,1.49e-17,168;CL:0000738,1.12e-16,136;CL:0000988,6.80e-16,177;CL:0002032,4.58e-15,161;CL:0000837,4.58e-15,161;CL:0002031,2.67e-14,120;CL:0002087,1.70e-13,115;CL:0000791,1.41e-10,18;CL:0000789,1.41e-10,18;CL:0002420,1.41e-10,18;CL:0002419,1.41e-10,18;CL:0000790,1.41e-10,18;CL:0000084,1.96e-10,25;CL:0000827,1.96e-10,25;CL:0000236,2.94e-08,14;CL:0000945,4.15e-08,24;CL:0000826,4.15e-08,24;CL:0000625,1.22e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;6.23e-12;53!CL:0000790;1.05e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@DKC1 | |||
}} | }} |
Latest revision as of 04:16, 20 September 2015
Short description: | p4@DKC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DKC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000369550, NM_001142463, NM_001363, uc004fmm.2, uc010nvf.2_5end |
EntrezGene: | DKC1 |
HGNC: | 2890 |
UniProt: | O60832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.64e-19 | 52 |
lymphocyte | 6.74e-19 | 53 |
common lymphoid progenitor | 6.74e-19 | 53 |
hematopoietic stem cell | 1.49e-17 | 168 |
leukocyte | 1.12e-16 | 136 |
hematopoietic cell | 6.80e-16 | 177 |
hematopoietic oligopotent progenitor cell | 4.58e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.58e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.67e-14 | 120 |
nongranular leukocyte | 1.70e-13 | 115 |
mature alpha-beta T cell | 1.41e-10 | 18 |
alpha-beta T cell | 1.41e-10 | 18 |
immature T cell | 1.41e-10 | 18 |
mature T cell | 1.41e-10 | 18 |
immature alpha-beta T cell | 1.41e-10 | 18 |
T cell | 1.96e-10 | 25 |
pro-T cell | 1.96e-10 | 25 |
B cell | 2.94e-08 | 14 |
lymphocyte of B lineage | 4.15e-08 | 24 |
pro-B cell | 4.15e-08 | 24 |
CD8-positive, alpha-beta T cell | 1.22e-07 | 11 |