FFCP PHASE1:Hg19::chrX:153991175..153991226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1736 | |EntrezGene=1736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2890 | |HGNC=2890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000473552_5end | |association_with_transcript=0bp_to_ENST00000473552_5end | ||
|cluster_id=chrX:153991175..153991226,+ | |||
|coexpression_cluster_id=C2971 | |||
|description=CAGE_peak_2_at_DKC1_5end | |description=CAGE_peak_2_at_DKC1_5end | ||
|id=chrX:153991175..153991226,+ | |id=chrX:153991175..153991226,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.56e-25!679;CL:0000004!1.56e-25!679;CL:0000255!1.56e-25!679;CL:0000012!1.59e-25!682;CL:0000066!3.75e-21!254;CL:0000063!1.62e-16!578;CL:0000003!1.23e-14!722;CL:0002321!2.02e-10!248;CL:0000220!4.84e-10!246;CL:0000076!3.79e-09!62;CL:0000144!9.74e-09!625;CL:0000223!6.80e-08!59 | |ontology_enrichment_celltype=CL:0000548!1.56e-25!679;CL:0000004!1.56e-25!679;CL:0000255!1.56e-25!679;CL:0000012!1.59e-25!682;CL:0000066!3.75e-21!254;CL:0000063!1.62e-16!578;CL:0000003!1.23e-14!722;CL:0002321!2.02e-10!248;CL:0000220!4.84e-10!246;CL:0000076!3.79e-09!62;CL:0000144!9.74e-09!625;CL:0000223!6.80e-08!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-21,253;CL:0002321,3.77e-10,250;CL:0000076,1.33e-08,63;CL:0000223,1.98e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.95e-07;29 | |||
|ontology_enrichment_disease=DOID:162!4.33e-64!235;DOID:14566!6.40e-64!239;DOID:0050686!1.35e-31!137;DOID:0050687!2.04e-31!143;DOID:305!1.01e-27!106;DOID:2531!7.48e-25!51;DOID:0060083!7.48e-25!51;DOID:1240!1.68e-21!39;DOID:8692!2.93e-18!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.07e-18;31!DOID:1240;4.60e-17;39!DOID:2531;1.67e-15;51!DOID:0060083;1.67e-15;51!DOID:305;9.01e-09;106!DOID:0050686;6.19e-08;137!DOID:162;2.89e-07;235!DOID:0050687;3.74e-07;143!DOID:14566;5.11e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.32e-64,235;DOID:14566,6.38e-64,239;DOID:0050686,1.35e-31,137;DOID:0050687,2.03e-31,143;DOID:305,1.00e-27,106;DOID:2531,7.47e-25,51;DOID:0060083,7.47e-25,51;DOID:1240,1.68e-21,39;DOID:8692,2.93e-18,31 | |||
|ontology_enrichment_uberon=UBERON:0000072!2.63e-07!46;UBERON:0001737!3.06e-07!9;UBERON:0008947!7.37e-07!38;UBERON:0003258!7.37e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-07;9!UBERON:0001557;2.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.06e-07,9;UBERON:0000072,7.33e-07,47;UBERON:0008947,7.37e-07,38;UBERON:0003258,7.37e-07,38 | |||
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| ||
|short_description=p2@DKC1 | |short_description=p2@DKC1 | ||
}} | }} |
Latest revision as of 04:18, 20 September 2015
Short description: | p2@DKC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DKC1_5end |
Coexpression cluster: | C2971_Mast_rhabdomyosarcoma_osteosarcoma_hepatoblastoma_malignant_acute_hepatocellular |
Association with transcript: | 0bp_to_ENST00000473552_5end |
EntrezGene: | DKC1 |
HGNC: | 2890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.62e-21 | 253 |
embryonic cell | 3.77e-10 | 250 |
squamous epithelial cell | 1.33e-08 | 63 |
endodermal cell | 1.98e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.06e-07 | 9 |
segment of respiratory tract | 7.33e-07 | 47 |
respiratory primordium | 7.37e-07 | 38 |
endoderm of foregut | 7.37e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.32e-64 | 235 |
disease of cellular proliferation | 6.38e-64 | 239 |
organ system cancer | 1.35e-31 | 137 |
cell type cancer | 2.03e-31 | 143 |
carcinoma | 1.00e-27 | 106 |
hematologic cancer | 7.47e-25 | 51 |
immune system cancer | 7.47e-25 | 51 |
leukemia | 1.68e-21 | 39 |
myeloid leukemia | 2.93e-18 | 31 |