FFCP PHASE1:Hg19::chrX:154299690..154299717,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:154299690..154299717,+
|short_description=p2@BRCC3
|description=CAGE_peak_2_at_BRCC3_5end
|association_with_transcript=0bp_to_ENST00000330045,ENST000003406...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79184 | |EntrezGene=79184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24185 | |HGNC=24185 | ||
|TSSclassifier=strong | |||
|UniProt=P46736 | |UniProt=P46736 | ||
|association_with_transcript=0bp_to_ENST00000330045,ENST00000340647,NM_001018055,NM_001242640,NM_024332,uc004fna.2,uc004fnb.2,uc011mzy.1,uc011mzz.1_5end | |||
|cluster_id=chrX:154299690..154299717,+ | |||
|description=CAGE_peak_2_at_BRCC3_5end | |||
|id=chrX:154299690..154299717,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.16e-10!172;CL:0000566!2.16e-10!172;CL:0000738!2.07e-09!140;CL:0002032!6.42e-09!165;CL:0000837!6.42e-09!165;CL:0000838!6.83e-09!52;CL:0000542!6.86e-09!53;CL:0000051!6.86e-09!53;CL:0000988!1.04e-07!182;CL:0000084!1.15e-07!25;CL:0000827!1.15e-07!25;CL:0002031!3.21e-07!124;CL:0000791!7.40e-07!18;CL:0000789!7.40e-07!18;CL:0002420!7.40e-07!18;CL:0002419!7.40e-07!18;CL:0000790!7.40e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.09e-08;25!CL:0000791;3.79e-07;18!CL:0000789;3.79e-07;18!CL:0002419;3.79e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.31e-10,168;CL:0000738,1.44e-09,136;CL:0000542,2.85e-09,53;CL:0000051,2.85e-09,53;CL:0000838,2.86e-09,52;CL:0002032,1.37e-08,161;CL:0000837,1.37e-08,161;CL:0000084,2.09e-08,25;CL:0000827,2.09e-08,25;CL:0000988,4.42e-08,177;CL:0000791,8.63e-08,18;CL:0000789,8.63e-08,18;CL:0002420,8.63e-08,18;CL:0002419,8.63e-08,18;CL:0000790,8.63e-08,18;CL:0002031,2.47e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.79e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@BRCC3 | |||
}} | }} |
Latest revision as of 04:42, 20 September 2015
Short description: | p2@BRCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BRCC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330045, ENST00000340647, NM_001018055, NM_001242640, NM_024332, uc004fna.2, uc004fnb.2, uc011mzy.1, uc011mzz.1_5end |
EntrezGene: | BRCC3 |
HGNC: | 24185 |
UniProt: | P46736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.31e-10 | 168 |
leukocyte | 1.44e-09 | 136 |
lymphocyte | 2.85e-09 | 53 |
common lymphoid progenitor | 2.85e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.86e-09 | 52 |
hematopoietic oligopotent progenitor cell | 1.37e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-08 | 161 |
T cell | 2.09e-08 | 25 |
pro-T cell | 2.09e-08 | 25 |
hematopoietic cell | 4.42e-08 | 177 |
mature alpha-beta T cell | 8.63e-08 | 18 |
alpha-beta T cell | 8.63e-08 | 18 |
immature T cell | 8.63e-08 | 18 |
mature T cell | 8.63e-08 | 18 |
immature alpha-beta T cell | 8.63e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 2.47e-07 | 120 |