FFCP PHASE1:Hg19::chr5:131705438..131705462,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6584 | |EntrezGene=6584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10969 | |HGNC=10969 | ||
|TSSclassifier=strong | |||
|UniProt=O76082 | |UniProt=O76082 | ||
|association_with_transcript=0bp_to_ENST00000245407_5end | |association_with_transcript=0bp_to_ENST00000245407_5end | ||
|cluster_id=chr5:131705438..131705462,+ | |||
|description=CAGE_peak_3_at_SLC22A5_5end | |description=CAGE_peak_3_at_SLC22A5_5end | ||
|id=chr5:131705438..131705462,+ | |id=chr5:131705438..131705462,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.25e-10!254 | |ontology_enrichment_celltype=CL:0000066!4.25e-10!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.62e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.79e-07;31 | |ontology_enrichment_development_v019=UBERON:0003104;8.79e-07;31 | ||
|ontology_enrichment_disease=DOID:305!8.39e-10!106;DOID:0050687!1.76e-08!143 | |ontology_enrichment_disease=DOID:305!8.39e-10!106;DOID:0050687!1.76e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.98e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.42e-13!115;UBERON:0004119!2.01e-10!169;UBERON:0000925!2.01e-10!169;UBERON:0006595!2.01e-10!169;UBERON:0000064!3.07e-09!219;UBERON:0001007!3.42e-09!155;UBERON:0001555!3.42e-09!155;UBERON:0007026!3.42e-09!155;UBERON:0000481!7.95e-09!347;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0000062!8.06e-08!511;UBERON:0001004!1.38e-07!72;UBERON:0000077!4.39e-07!130 | |ontology_enrichment_uberon=UBERON:0007023!8.42e-13!115;UBERON:0004119!2.01e-10!169;UBERON:0000925!2.01e-10!169;UBERON:0006595!2.01e-10!169;UBERON:0000064!3.07e-09!219;UBERON:0001007!3.42e-09!155;UBERON:0001555!3.42e-09!155;UBERON:0007026!3.42e-09!155;UBERON:0000481!7.95e-09!347;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0000062!8.06e-08!511;UBERON:0001004!1.38e-07!72;UBERON:0000077!4.39e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.62e-08;9!UBERON:0001557;3.62e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;3.62e-08;9!UBERON:0001557;3.62e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.76e-11,160;UBERON:0000925,4.76e-11,160;UBERON:0006595,4.76e-11,160;UBERON:0007023,1.50e-09,114;UBERON:0004921,2.74e-09,118;UBERON:0001007,2.78e-09,145;UBERON:0001555,2.78e-09,145;UBERON:0007026,2.78e-09,145;UBERON:0001737,5.59e-09,9;UBERON:0001004,3.39e-08,74;UBERON:0000489,5.45e-07,31;UBERON:0005631,5.85e-07,14;UBERON:0000158,5.85e-07,14;UBERON:0006554,8.34e-07,47 | |||
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| ||
|short_description=p3@SLC22A5 | |short_description=p3@SLC22A5 | ||
}} | }} |
Latest revision as of 04:43, 20 September 2015
Short description: | p3@SLC22A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC22A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000245407_5end |
EntrezGene: | SLC22A5 |
HGNC: | 10969 |
UniProt: | O76082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.62e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.76e-11 | 160 |
endoderm | 4.76e-11 | 160 |
presumptive endoderm | 4.76e-11 | 160 |
adult organism | 1.50e-09 | 114 |
subdivision of digestive tract | 2.74e-09 | 118 |
digestive system | 2.78e-09 | 145 |
digestive tract | 2.78e-09 | 145 |
primitive gut | 2.78e-09 | 145 |
larynx | 5.59e-09 | 9 |
respiratory system | 3.39e-08 | 74 |
cavitated compound organ | 5.45e-07 | 31 |
extraembryonic membrane | 5.85e-07 | 14 |
membranous layer | 5.85e-07 | 14 |
urinary system structure | 8.34e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.98e-09 | 106 |