FFCP PHASE1:Hg19::chr17:39538756..39538771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100653049,3885 | |EntrezGene=100653049,3885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6452 | |HGNC=6452 | ||
|TSSclassifier=strong | |||
|UniProt=O76011,C4AMA3 | |UniProt=O76011,C4AMA3 | ||
|association_with_transcript=-101bp_to_ENST00000251648,ENST00000394001_5end | |association_with_transcript=-101bp_to_ENST00000251648,ENST00000394001_5end | ||
|cluster_id=chr17:39538756..39538771,- | |||
|description=CAGE_peak_2_at_KRT34_5end | |description=CAGE_peak_2_at_KRT34_5end | ||
|id=chr17:39538756..39538771,- | |id=chr17:39538756..39538771,- | ||
|ontology_enrichment_celltype=CL:0000057!5.91e-19!75;CL:0002620!4.25e-15!23;CL:0000055!6.14e-13!180;CL:0002334!2.92e-10!12;CL:0002371!2.26e-08!591;CL:0000144!3.45e-08!625;CL:0000548!9.24e-08!679;CL:0000004!9.24e-08!679;CL:0000255!9.24e-08!679;CL:0002537!1.03e-07!5;CL:0000012!1.42e-07!682 | |ontology_enrichment_celltype=CL:0000057!5.91e-19!75;CL:0002620!4.25e-15!23;CL:0000055!6.14e-13!180;CL:0002334!2.92e-10!12;CL:0002371!2.26e-08!591;CL:0000144!3.45e-08!625;CL:0000548!9.24e-08!679;CL:0000004!9.24e-08!679;CL:0000255!9.24e-08!679;CL:0002537!1.03e-07!5;CL:0000012!1.42e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002536;4.51e-13;2!CL:0002552;2.49e-11;5!CL:0002601;1.40e-07;1!CL:0000511;3.61e-07;1!CL:0002625;3.61e-07;1!CL:0002581;3.61e-07;1!CL:0000216;3.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,4.68e-13,2;CL:0002552,4.32e-11,5;CL:0002601,1.20e-07,1;CL:0000511,1.85e-07,1;CL:0002625,1.85e-07,1;CL:0000216,1.85e-07,1;CL:0002581,2.52e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;3.61e-07;1!DOID:2513;3.61e-07;1!DOID:4235;3.61e-07;1!DOID:3603;3.61e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.74e-07,1;DOID:4235,2.09e-07,1;DOID:3111,5.84e-07,1;DOID:3603,5.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.28e-14!95;UBERON:0002097!6.63e-13!40;UBERON:0004871!3.30e-12!8;UBERON:0002199!6.36e-12!45;UBERON:0002416!6.36e-12!45;UBERON:0000305!1.08e-10!7;UBERON:0005631!5.20e-09!14;UBERON:0000158!5.20e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.17e-08;7!UBERON:0001828;2.99e-07;8!UBERON:0001136;3.61e-07;1!UBERON:0001343;3.61e-07;1!UBERON:0004910;3.61e-07;1!UBERON:0004813;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,4.41e-12,8;UBERON:0000305,4.13e-08,7;UBERON:0001136,1.85e-07,1;UBERON:0001343,1.85e-07,1;UBERON:0004910,1.85e-07,1;UBERON:0005154,1.85e-07,1;UBERON:0005295,1.85e-07,1;UBERON:0004813,1.85e-07,1;UBERON:0005297,1.85e-07,1;UBERON:0005294,1.85e-07,1;UBERON:0010141,1.85e-07,1;UBERON:0005891,1.85e-07,1;UBERON:0001828,4.19e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,2.18441372130172,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,2.24569588380383,0.122834317311768,1.03325781175765,1.18800285728205,0,0,0,0.168336113954066,0.625592599359821,5.26421819419948,0,1.22595118319608,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,1.03056216018252,0.18611685633159,1.5189869901714,0.584622030967192,0.757301322732344,0,0.161646056818812,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,2.24803506515239,1.3068766413512,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,1.05427273493442,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0.604780586659361,0.496215615637554,0.61384789315225,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,1.48418066444991,0.462629081407967,0,0.246381468041427,0,0.116210378459959,0,0,2.11786274552562,0.229628896329213,0.546273504020151,0.131124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0.462145851343933,0.307007349452259,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,1.39453664789186,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,1.50149902548784,0,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0,0.286822704408103,0.589494246078727,0,2.48332744849418,0,0.329294892959902,0,0,0.48111056362756,0,0,0,0.43050537267123,3.36942951335251,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0.102268682502155,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35059857767087,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,3.47907099583211,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0,0.889811221596536,1.60188047877847,0,0,0,0.63718706865481,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0.406870733204662,1.09109195521536,0.107410557042488,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0,0,0,1.4327107286519,0,0,1.41351316756705,0,0,0,0.690860683462397,0.607719912354764,0,0,0,0,0,0,1.05656061679314,0,0,0,0.567515953566836,0.920529751259204,0.279759015438889,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,1.52934403219035,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,2.18441372130172,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,2.24569588380383,0.122834317311768,1.03325781175765,1.18800285728205,0,0,0,0.168336113954066,0.625592599359821,5.26421819419948,0,1.22595118319608,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,1.03056216018252,0.18611685633159,1.5189869901714,0.584622030967192,0.757301322732344,0,0.161646056818812,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,2.24803506515239,1.3068766413512,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,1.05427273493442,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0.604780586659361,0.496215615637554,0.61384789315225,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,1.48418066444991,0.462629081407967,0,0.246381468041427,0,0.116210378459959,0,0,2.11786274552562,0.229628896329213,0.546273504020151,0.131124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0.462145851343933,0.307007349452259,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,1.39453664789186,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,1.50149902548784,0,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0,0.286822704408103,0.589494246078727,0,2.48332744849418,0,0.329294892959902,0,0,0.48111056362756,0,0,0,0.43050537267123,3.36942951335251,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0.102268682502155,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35059857767087,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,3.47907099583211,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0,0.889811221596536,1.60188047877847,0,0,0,0.63718706865481,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0.406870733204662,1.09109195521536,0.107410557042488,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0,0,0,1.4327107286519,0,0,1.41351316756705,0,0,0,0.690860683462397,0.607719912354764,0,0,0,0,0,0,1.05656061679314,0,0,0,0.567515953566836,0.920529751259204,0.279759015438889,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,1.52934403219035,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p2@KRT34 | |short_description=p2@KRT34 | ||
}} | }} |
Latest revision as of 04:52, 20 September 2015
Short description: | p2@KRT34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT34_5end |
Coexpression cluster: | NA |
Association with transcript: | -101bp_to_ENST00000251648, ENST00000394001_5end |
EntrezGene: | 100653049,3885 |
HGNC: | 6452 |
UniProt: | O76011C4AMA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 4.68e-13 | 2 |
fibroblast of gingiva | 4.32e-11 | 5 |
uterine smooth muscle cell | 1.20e-07 | 1 |
androgen binding protein secreting cell | 1.85e-07 | 1 |
seminiferous tubule epithelial cell | 1.85e-07 | 1 |
Sertoli cell | 1.85e-07 | 1 |
perirenal preadipocyte | 2.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 4.41e-12 | 8 |
amnion | 4.13e-08 | 7 |
mesothelium | 1.85e-07 | 1 |
seminiferous tubule of testis | 1.85e-07 | 1 |
epithelium of male gonad | 1.85e-07 | 1 |
epithelial cord | 1.85e-07 | 1 |
sex cord | 1.85e-07 | 1 |
seminiferous tubule epithelium | 1.85e-07 | 1 |
testis sex cord | 1.85e-07 | 1 |
genital ridge | 1.85e-07 | 1 |
primitive sex cord of indifferent gonad | 1.85e-07 | 1 |
coelomic epithelium | 1.85e-07 | 1 |
gingiva | 4.19e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.74e-07 | 1 |
spindle cell sarcoma | 2.09e-07 | 1 |
cystadenocarcinoma | 5.84e-07 | 1 |
mucinous cystadenocarcinoma | 5.84e-07 | 1 |