FFCP PHASE1:Hg19::chr9:114393412..114393430,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=23369 | |HGNC=23369 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JVP1 | |UniProt=Q5JVP1 | ||
|association_with_transcript=138bp_to_ENST00000374304,uc004bfk.3_5end | |association_with_transcript=138bp_to_ENST00000374304,uc004bfk.3_5end | ||
|cluster_id=chr9:114393412..114393430,- | |||
|description=CAGE_peak_2_at_C9orf29_5end | |description=CAGE_peak_2_at_C9orf29_5end | ||
|id=chr9:114393412..114393430,- | |id=chr9:114393412..114393430,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;1.54e-07;2!CL:0000669;2.08e-07;4!CL:1000746;5.12e-07;7!CL:1000612;5.12e-07;7!CL:0000650;9.78e-07;2!CL:1000500;9.78e-07;2!CL:1000618;9.78e-07;2!CL:1001318;9.78e-07;2!CL:0000575;9.78e-07;2!CL:0002173;9.78e-07;2 | |ontology_enrichment_celltype_v019=CL:0002363;1.54e-07;2!CL:0000669;2.08e-07;4!CL:1000746;5.12e-07;7!CL:1000612;5.12e-07;7!CL:0000650;9.78e-07;2!CL:1000500;9.78e-07;2!CL:1000618;9.78e-07;2!CL:1001318;9.78e-07;2!CL:0000575;9.78e-07;2!CL:0002173;9.78e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.57e-07,2;CL:0000008,1.57e-07,2;CL:0000669,2.36e-07,4;CL:1000746,5.11e-07,7;CL:1000612,5.11e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000008;1.54e-07;2!UBERON:0010122;9.78e-07;2 | |ontology_enrichment_development_v019=CL:0000008;1.54e-07;2!UBERON:0010122;9.78e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.08e-15!365;UBERON:0000481!8.98e-13!347;UBERON:0005743!4.04e-10!86;UBERON:0003075!5.23e-10!86;UBERON:0007284!5.23e-10!86;UBERON:0000119!6.44e-10!312;UBERON:0000033!8.19e-10!123;UBERON:0002346!9.64e-10!90;UBERON:0003056!1.05e-09!61;UBERON:0000483!1.19e-09!309;UBERON:0001017!4.29e-09!82;UBERON:0000153!9.88e-09!129;UBERON:0007811!9.88e-09!129;UBERON:0000073!1.04e-08!94;UBERON:0001016!1.04e-08!94;UBERON:0000955!2.31e-08!69;UBERON:0006238!2.31e-08!69;UBERON:0004121!8.35e-08!169;UBERON:0000924!9.73e-08!173;UBERON:0006601!9.73e-08!173;UBERON:0001049!1.04e-07!57;UBERON:0005068!1.04e-07!57;UBERON:0006241!1.04e-07!57;UBERON:0007135!1.04e-07!57;UBERON:0002616!1.33e-07!59;UBERON:0000477!1.89e-07!286;UBERON:0000064!3.91e-07!219;UBERON:0002104!4.80e-07!21 | |ontology_enrichment_uberon=UBERON:0000475!1.08e-15!365;UBERON:0000481!8.98e-13!347;UBERON:0005743!4.04e-10!86;UBERON:0003075!5.23e-10!86;UBERON:0007284!5.23e-10!86;UBERON:0000119!6.44e-10!312;UBERON:0000033!8.19e-10!123;UBERON:0002346!9.64e-10!90;UBERON:0003056!1.05e-09!61;UBERON:0000483!1.19e-09!309;UBERON:0001017!4.29e-09!82;UBERON:0000153!9.88e-09!129;UBERON:0007811!9.88e-09!129;UBERON:0000073!1.04e-08!94;UBERON:0001016!1.04e-08!94;UBERON:0000955!2.31e-08!69;UBERON:0006238!2.31e-08!69;UBERON:0004121!8.35e-08!169;UBERON:0000924!9.73e-08!173;UBERON:0006601!9.73e-08!173;UBERON:0001049!1.04e-07!57;UBERON:0005068!1.04e-07!57;UBERON:0006241!1.04e-07!57;UBERON:0007135!1.04e-07!57;UBERON:0002616!1.33e-07!59;UBERON:0000477!1.89e-07!286;UBERON:0000064!3.91e-07!219;UBERON:0002104!4.80e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.34e-12;4!UBERON:0000964;1.34e-12;4!UBERON:0010409;1.34e-12;4!UBERON:0005383;2.74e-09;3!UBERON:0005382;2.74e-09;3!UBERON:0003566;1.54e-07;2!UBERON:0001777;1.54e-07;2!UBERON:0000369;4.63e-07;4!UBERON:0002435;4.63e-07;4!UBERON:0000204;4.63e-07;4!UBERON:0000074;5.12e-07;7!UBERON:0001229;5.12e-07;7!UBERON:0003126;9.22e-07;7!UBERON:0001005;9.22e-07;7!UBERON:0001873;9.78e-07;2!UBERON:0003567;9.78e-07;2!UBERON:0003838;9.78e-07;2!UBERON:0003586;9.78e-07;2!UBERON:0005169;9.78e-07;2!UBERON:0002321;9.78e-07;2!UBERON:0005215;9.78e-07;2!UBERON:0002303;9.78e-07;2!UBERON:0002319;9.78e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003891;1.34e-12;4!UBERON:0000964;1.34e-12;4!UBERON:0010409;1.34e-12;4!UBERON:0005383;2.74e-09;3!UBERON:0005382;2.74e-09;3!UBERON:0003566;1.54e-07;2!UBERON:0001777;1.54e-07;2!UBERON:0000369;4.63e-07;4!UBERON:0002435;4.63e-07;4!UBERON:0000204;4.63e-07;4!UBERON:0000074;5.12e-07;7!UBERON:0001229;5.12e-07;7!UBERON:0003126;9.22e-07;7!UBERON:0001005;9.22e-07;7!UBERON:0001873;9.78e-07;2!UBERON:0003567;9.78e-07;2!UBERON:0003838;9.78e-07;2!UBERON:0003586;9.78e-07;2!UBERON:0005169;9.78e-07;2!UBERON:0002321;9.78e-07;2!UBERON:0005215;9.78e-07;2!UBERON:0002303;9.78e-07;2!UBERON:0002319;9.78e-07;2 | ||
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| ||
|short_description=p2@C9orf29 | |short_description=p2@C9orf29 | ||
}} | }} |
Latest revision as of 04:57, 20 September 2015
Short description: | p2@C9orf29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C9orf29_5end |
Coexpression cluster: | NA |
Association with transcript: | 138bp_to_ENST00000374304, uc004bfk.3_5end |
EntrezGene: | NA |
HGNC: | 23369 |
UniProt: | Q5JVP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.57e-07 | 2 |
migratory cranial neural crest cell | 1.57e-07 | 2 |
pericyte cell | 2.36e-07 | 4 |
glomerular cell | 5.11e-07 | 7 |
kidney corpuscule cell | 5.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
stroma | 1.47e-12 | 4 |
cornea | 3.16e-12 | 4 |
eye surface | 3.16e-12 | 4 |
optic eminence | 3.16e-12 | 4 |
corneal primordium | 3.16e-12 | 4 |
caudate-putamen | 6.62e-10 | 3 |
dorsal striatum | 6.62e-10 | 3 |
pre-chordal neural plate | 2.73e-08 | 61 |
head connective tissue | 1.57e-07 | 2 |
substantia propria of cornea | 1.57e-07 | 2 |
corpus striatum | 1.62e-07 | 4 |
striatum | 1.62e-07 | 4 |
ventral part of telencephalon | 1.62e-07 | 4 |
future corpus striatum | 1.62e-07 | 4 |
caudate nucleus | 4.07e-07 | 2 |
future caudate nucleus | 4.07e-07 | 2 |
primitive nephron | 5.11e-07 | 7 |
renal glomerulus | 5.11e-07 | 7 |
renal corpuscle | 5.11e-07 | 7 |
glomerular capsule | 5.11e-07 | 7 |
metanephric mesenchyme | 5.11e-07 | 7 |
glomerular tuft | 5.11e-07 | 7 |
S-shaped body | 5.11e-07 | 7 |
renal vesicle | 5.11e-07 | 7 |
comma-shaped body | 5.11e-07 | 7 |