FFCP PHASE1:Hg19::chr18:63417762..63417774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1005 | |EntrezGene=1005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1766 | |HGNC=1766 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5X9 | |UniProt=F5H5X9 | ||
|association_with_transcript=-114bp_to_ENST00000536984_5end | |association_with_transcript=-114bp_to_ENST00000536984_5end | ||
|cluster_id=chr18:63417762..63417774,+ | |||
|description=CAGE_peak_2_at_CDH7_5end | |description=CAGE_peak_2_at_CDH7_5end | ||
|id=chr18:63417762..63417774,+ | |id=chr18:63417762..63417774,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.09e-08!5 | |ontology_enrichment_celltype=CL:0002322!1.09e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.88e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.88e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.54e-08;3 | |||
|ontology_enrichment_disease=DOID:171!7.71e-13!10;DOID:3095!2.41e-08!22;DOID:2994!2.41e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.94e-18;10!DOID:3193;3.70e-11;2!DOID:962;3.70e-11;2!DOID:3095;9.68e-09;22!DOID:2994;9.68e-09;22!DOID:1192;7.26e-08;3!DOID:3093;1.67e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.33e-18,10;DOID:3193,4.09e-11,2;DOID:962,4.09e-11,2;DOID:3095,1.05e-08,22;DOID:2994,1.05e-08,22;DOID:1192,7.76e-08,3;DOID:3093,1.73e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.56e-40!94;UBERON:0001016!8.56e-40!94;UBERON:0001017!1.90e-38!82;UBERON:0005743!3.15e-38!86;UBERON:0000955!7.92e-37!69;UBERON:0006238!7.92e-37!69;UBERON:0001049!2.05e-33!57;UBERON:0005068!2.05e-33!57;UBERON:0006241!2.05e-33!57;UBERON:0007135!2.05e-33!57;UBERON:0001869!1.59e-32!32;UBERON:0002346!7.75e-31!90;UBERON:0002020!1.54e-30!34;UBERON:0003528!1.54e-30!34;UBERON:0001893!2.59e-30!34;UBERON:0002616!1.60e-29!59;UBERON:0002791!1.89e-28!33;UBERON:0002780!7.35e-27!41;UBERON:0001890!7.35e-27!41;UBERON:0006240!7.35e-27!41;UBERON:0003080!4.36e-26!42;UBERON:0000924!1.25e-25!173;UBERON:0006601!1.25e-25!173;UBERON:0002619!3.10e-25!22;UBERON:0003075!1.34e-24!86;UBERON:0007284!1.34e-24!86;UBERON:0001950!1.80e-24!20;UBERON:0000956!7.78e-22!25;UBERON:0000203!7.78e-22!25;UBERON:0004121!5.46e-21!169;UBERON:0000153!5.04e-19!129;UBERON:0007811!5.04e-19!129;UBERON:0007023!8.74e-19!115;UBERON:0000033!6.43e-18!123;UBERON:0003056!9.69e-18!61;UBERON:0000200!3.16e-15!6;UBERON:0002021!2.47e-13!5;UBERON:0002308!3.78e-10!9;UBERON:0000125!3.78e-10!9;UBERON:0002420!5.02e-10!9;UBERON:0007245!5.02e-10!9;UBERON:0010009!5.02e-10!9;UBERON:0010011!5.02e-10!9;UBERON:0000454!5.02e-10!9;UBERON:0009663!3.00e-09!7;UBERON:0003076!1.94e-08!15;UBERON:0003057!1.94e-08!15;UBERON:0002771!2.33e-08!3;UBERON:0004733!5.05e-08!12;UBERON:0002028!5.05e-08!12;UBERON:0007277!5.05e-08!12;UBERON:0002680!5.61e-08!9;UBERON:0001895!5.61e-08!9;UBERON:0010092!5.61e-08!9;UBERON:0001871!9.58e-08!7;UBERON:0004732!2.42e-07!13;UBERON:0000025!5.66e-07!194;UBERON:0000064!7.00e-07!219;UBERON:0000475!9.71e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.55e-21;4!UBERON:0000923;8.55e-21;4!UBERON:0010316;8.55e-21;4!UBERON:0005291;8.55e-21;4!UBERON:0002050;7.51e-17;5!UBERON:0005423;7.51e-17;5!UBERON:0003714;3.70e-11;2!UBERON:0002680;7.74e-10;9!UBERON:0001895;7.74e-10;9!UBERON:0002369;4.52e-08;3!UBERON:0001235;4.52e-08;3!UBERON:0006858;4.52e-08;3!UBERON:0000988;5.93e-08;3!UBERON:0004733;1.33e-07;12!UBERON:0002028;1.33e-07;12!UBERON:0004732;4.39e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.09e-11,2;UBERON:0002680,7.74e-10,9;UBERON:0001895,7.74e-10,9;UBERON:0010092,7.74e-10,9;UBERON:0002369,4.52e-08,3;UBERON:0001235,4.52e-08,3;UBERON:0006858,4.52e-08,3;UBERON:0000988,5.93e-08,3;UBERON:0004733,1.33e-07,12;UBERON:0002028,1.33e-07,12;UBERON:0007277,1.33e-07,12;UBERON:0004732,4.39e-07,13 | |||
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| ||
|short_description=p2@CDH7 | |short_description=p2@CDH7 | ||
}} | }} |
Latest revision as of 05:23, 20 September 2015
Short description: | p2@CDH7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH7_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_ENST00000536984_5end |
EntrezGene: | CDH7 |
HGNC: | 1766 |
UniProt: | F5H5X9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.88e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.09e-11 | 2 |
regional part of metencephalon | 7.74e-10 | 9 |
metencephalon | 7.74e-10 | 9 |
future metencephalon | 7.74e-10 | 9 |
adrenal gland | 4.52e-08 | 3 |
adrenal cortex | 4.52e-08 | 3 |
adrenal/interrenal gland | 4.52e-08 | 3 |
pons | 5.93e-08 | 3 |
segmental subdivision of hindbrain | 1.33e-07 | 12 |
hindbrain | 1.33e-07 | 12 |
presumptive hindbrain | 1.33e-07 | 12 |
segmental subdivision of nervous system | 4.39e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.33e-18 | 10 |
peripheral nerve sheath neoplasm | 4.09e-11 | 2 |
neurofibroma | 4.09e-11 | 2 |
germ cell and embryonal cancer | 1.05e-08 | 22 |
germ cell cancer | 1.05e-08 | 22 |
peripheral nervous system neoplasm | 7.76e-08 | 3 |
nervous system cancer | 1.73e-07 | 11 |