FFCP PHASE1:Hg19::chr22:38093005..38093067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11078 | |EntrezGene=11078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17009 | |HGNC=17009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2D6,C9JFG4 | |UniProt=Q9H2D6,C9JFG4 | ||
|association_with_transcript=0bp_to_ENST00000406386,ENST00000417174_5end | |association_with_transcript=0bp_to_ENST00000406386,ENST00000417174_5end | ||
|cluster_id=chr22:38093005..38093067,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_3_at_TRIOBP_5end | |description=CAGE_peak_3_at_TRIOBP_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.18e-20!180;CL:0000393!2.18e-13!60;CL:0000211!2.18e-13!60;CL:0000183!8.91e-12!59;CL:0000680!1.75e-10!57;CL:0000056!1.75e-10!57;CL:0000355!1.75e-10!57;CL:0000187!4.86e-10!54;CL:0000192!3.59e-09!42;CL:0000514!3.59e-09!42;CL:0002319!6.29e-09!25;CL:0000133!2.36e-08!59;CL:0000359!5.52e-08!32;CL:0000047!2.92e-07!8;CL:0002321!6.74e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.18e-20!180;CL:0000393!2.18e-13!60;CL:0000211!2.18e-13!60;CL:0000183!8.91e-12!59;CL:0000680!1.75e-10!57;CL:0000056!1.75e-10!57;CL:0000355!1.75e-10!57;CL:0000187!4.86e-10!54;CL:0000192!3.59e-09!42;CL:0000514!3.59e-09!42;CL:0002319!6.29e-09!25;CL:0000133!2.36e-08!59;CL:0000359!5.52e-08!32;CL:0000047!2.92e-07!8;CL:0002321!6.74e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.72e-09;25!CL:0000540;3.50e-08;6!CL:0000404;3.50e-08;6!CL:0000359;6.69e-08;32!CL:1000497;7.46e-08;17!CL:0002518;7.46e-08;17!CL:0002321;3.51e-07;15!CL:0002322;4.00e-07;5 | |ontology_enrichment_celltype_v019=CL:0002319;1.72e-09;25!CL:0000540;3.50e-08;6!CL:0000404;3.50e-08;6!CL:0000359;6.69e-08;32!CL:1000497;7.46e-08;17!CL:0002518;7.46e-08;17!CL:0002321;3.51e-07;15!CL:0002322;4.00e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.16e-11,61;CL:0000211,1.16e-11,61;CL:0000047,3.42e-10,8;CL:0002319,1.39e-09,25;CL:0000540,3.70e-08,6;CL:0000031,3.70e-08,6;CL:0000404,3.70e-08,6;CL:0000359,5.93e-08,32;CL:1000497,7.64e-08,17;CL:0002518,7.64e-08,17;CL:0000187,1.08e-07,55;CL:0000192,1.73e-07,43;CL:0000514,1.73e-07,43;CL:0000133,2.07e-07,59;CL:0000680,2.10e-07,58;CL:0000056,2.10e-07,58;CL:0000355,2.10e-07,58;CL:0002322,4.10e-07,5;CL:0002321,5.21e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000031;3.50e-08;6 | |ontology_enrichment_development_v019=CL:0000031;3.50e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:3095,8.37e-07,22;DOID:2994,8.37e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.13e-09!83;UBERON:0002329!1.13e-09!83;UBERON:0003077!1.13e-09!83;UBERON:0003059!1.13e-09!83;UBERON:0007282!1.13e-09!83;UBERON:0009618!1.13e-09!83;UBERON:0007285!1.13e-09!83;UBERON:0000481!1.77e-09!347;UBERON:0001134!1.89e-09!61;UBERON:0002036!1.89e-09!61;UBERON:0003082!1.89e-09!61;UBERON:0000475!2.34e-09!365;UBERON:0000073!2.45e-09!94;UBERON:0001016!2.45e-09!94;UBERON:0000119!2.54e-09!312;UBERON:0002385!5.38e-09!63;UBERON:0001015!5.38e-09!63;UBERON:0000383!5.38e-09!63;UBERON:0004290!6.69e-09!70;UBERON:0000483!1.08e-08!309;UBERON:0005743!3.34e-08!86;UBERON:0001017!1.30e-07!82;UBERON:0000486!4.01e-07!82;UBERON:0004121!6.19e-07!169 | |ontology_enrichment_uberon=UBERON:0000914!1.13e-09!83;UBERON:0002329!1.13e-09!83;UBERON:0003077!1.13e-09!83;UBERON:0003059!1.13e-09!83;UBERON:0007282!1.13e-09!83;UBERON:0009618!1.13e-09!83;UBERON:0007285!1.13e-09!83;UBERON:0000481!1.77e-09!347;UBERON:0001134!1.89e-09!61;UBERON:0002036!1.89e-09!61;UBERON:0003082!1.89e-09!61;UBERON:0000475!2.34e-09!365;UBERON:0000073!2.45e-09!94;UBERON:0001016!2.45e-09!94;UBERON:0000119!2.54e-09!312;UBERON:0002385!5.38e-09!63;UBERON:0001015!5.38e-09!63;UBERON:0000383!5.38e-09!63;UBERON:0004290!6.69e-09!70;UBERON:0000483!1.08e-08!309;UBERON:0005743!3.34e-08!86;UBERON:0001017!1.30e-07!82;UBERON:0000486!4.01e-07!82;UBERON:0004121!6.19e-07!169 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.76e-07,78;UBERON:0001134,4.37e-07,62;UBERON:0002036,4.37e-07,62;UBERON:0003082,4.37e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,10.0750913965619,13.2582221914761,0.873765488520689,1.58260186937072,1.73272894144065,0.662794751455832,0,0.602694528023977,0,0,4.18611597461079,3.67201244239655,4.38836610069323,5.72471974262113,7.8018422291544,6.15158934014534,1.83392173795083,0.656804715599566,0.787107813136792,0,0,0,0,0.6024118375565,0,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,1.44575660953827,0.50133791063589,3.18662341713812,1.5905718941022,5.35298357332899,1.60709189178915,0.443458794925128,0.87834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0.571994910780128,0,0.39752481473341,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0.357198913136319,0,0.900891843866578,1.53316637465883,0,0.916008719652036,0,0,1.3082821564276,1.49091585508596,0.25326102332916,0.529636723252875,0,1.06400514659507,1.68203280042692,2.1349799145941,1.97334038733728,0.311211035399766,1.75123873690594,0.490385709340376,1.66493170409425,0,1.87457145467037,0,0.570471821544449,0.149448680551801,0.469737994575059,1.61872944368132,1.40450806702248,1.02077085627447,5.15904132709426,0.619954687054593,0,0,0.910161361938026,0,5.38675564653012,12.8872075468123,0.831192346452549,1.31693286264251,0,0.150238058906597,0.340296549480063,2.15267562826634,1.70845911054854,1.05965950579781,1.20036438433761,0.721367704669072,0.772921620136887,0.37223371266318,0.168776332241266,1.07180705677318,3.78650661366172,1.65689817556139,1.45481451136931,1.42003837006646,1.30977727695932,2.20428770003634,0,0,0,14.3928973232923,17.758988955079,31.7209464033785,14.7198698121826,26.9983310436922,20.4387321082465,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,0,0,0,0,0.441463099414651,0.245976877086227,8.23525489432923,3.29250856225877,0,0,0.277765335475589,4.56131627434455,10.3993478527958,12.9898207822746,9.5062932079563,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.901029173531752,0,1.68196626518041,2.61576041299968,1.39342743059805,0.387815147273333,0,0,0,0,1.80045161983499,1.41849132023278,1.5985330740966,1.57275793023962,0,0,0,1.42156779497018,0.791951872933429,0,0,0.499864955910285,0,0,0,0,0,1.42636905040718,0.579125226670317,1.02738161275192,0.716243852959582,0,0,0,0,7.36874410245144,31.2335649258292,20.1055091322201,12.5637199000762,14.6725912880228,0,0,0,0.858840442033979,1.00034104211935,1.08506009479894,1.45579603071565,0,0.157702415033935,0.585707074963566,1.50473049863859,0,3.10419213877515,0,2.02806085395873,0.868836144680828,2.34961388955289,1.71571711905428,0,0,0,0.303127571446259,0,1.20956117331872,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0.328508624055237,0,0.581051892299796,0.120859449591622,12.0303882181971,0,0,0.182091168006717,0,8.57279264524082,9.70393247515626,8.62784746094541,4.38417673959782,8.54968194032293,0,1.02056223165909,1.0795795805107,0,1.89662506280697,5.51858751240339,0,0,7.38786690583188,0,0,0.512900250232778,2.29610251989794,0.325378394664303,0,0,0.165018999841176,0.574265537996172,0,8.03419649220798,2.80345083047154,0.308097234229289,0.614014698904518,0.551346289938122,0.751941714077915,1.0151168573996,1.02271952899321,1.15741646340759,2.14870389969272,1.72971060628596,3.82838137483752,1.4162089319777,5.57814659156743,9.75918275174984,1.3940745403212,2.7723022215848,0.532306030317022,3.47973196830029,1.48259375283136,0.572499546967965,1.116475108079,0.316379424718726,0,2.04718233049067,0,2.22742273548156,14.1290755235861,0.719489830333259,1.37268514868027,0.824686816419805,1.01091240786658,1.58510321173008,0.842516912477962,0.975267478179181,1.70599442741899,3.16950440270266,0,0.282810863907425,1.13008116620243,5.51365343546124,2.65375590096488,3.94605796728386,1.15755106853338,1.31178950409327,9.53678771724709,5.5768229657955,2.53526042279017,0.573645408816206,0.785992328104969,7.84676313258751,1.06428319221179,0.422215270595328,0,7.20999030154859,18.1966054527391,0.192444225451024,0,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,4.3797869162264,0,0.245040215981032,0,3.02965347250534,0.0711418433484141,0,0,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,2.76444631889309,0,0.562677665642051,0,0,13.5120261201916,0.398495976502139,0.276283915531148,1.76352923497993,0.20453736500431,1.96935688737711,9.33118762985422,0,0.179021174675609,1.02314474045374,0.591860433821602,0,0,0,0.09276809816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| ||
|short_description=p3@TRIOBP | |short_description=p3@TRIOBP | ||
}} | }} |
Latest revision as of 06:09, 20 September 2015
Short description: | p3@TRIOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIOBP_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000406386, ENST00000417174_5end |
EntrezGene: | TRIOBP |
HGNC: | 17009 |
UniProt: | Q9H2D6C9JFG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.16e-11 | 61 |
electrically active cell | 1.16e-11 | 61 |
neuronal stem cell | 3.42e-10 | 8 |
neural cell | 1.39e-09 | 25 |
neuron | 3.70e-08 | 6 |
neuroblast | 3.70e-08 | 6 |
electrically signaling cell | 3.70e-08 | 6 |
vascular associated smooth muscle cell | 5.93e-08 | 32 |
kidney cell | 7.64e-08 | 17 |
kidney epithelial cell | 7.64e-08 | 17 |
muscle cell | 1.08e-07 | 55 |
smooth muscle cell | 1.73e-07 | 43 |
smooth muscle myoblast | 1.73e-07 | 43 |
neurectodermal cell | 2.07e-07 | 59 |
muscle precursor cell | 2.10e-07 | 58 |
myoblast | 2.10e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.10e-07 | 58 |
embryonic stem cell | 4.10e-07 | 5 |
embryonic cell | 5.21e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.76e-07 | 78 |
skeletal muscle tissue | 4.37e-07 | 62 |
striated muscle tissue | 4.37e-07 | 62 |
myotome | 4.37e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.37e-07 | 22 |
germ cell cancer | 8.37e-07 | 22 |