FFCP PHASE1:Hg19::chr16:11650476..11650513,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:11650476..11650513,- to FFCP PHASE1:Hg19::chr16:11650476..11650513,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_EU446689,EU831762,EU831840_5end | |||
|cluster_id=chr16:11650476..11650513,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_7_at_LITAF_5end | |||
|id=chr16:11650476..11650513,- | |||
|ontology_enrichment_celltype=CL:0000766!1.15e-24!76;CL:0000557!3.62e-21!71;CL:0002009!3.80e-21!65;CL:0002194!1.85e-20!63;CL:0000576!1.85e-20!63;CL:0000040!1.85e-20!63;CL:0000559!1.85e-20!63;CL:0000839!3.62e-20!70;CL:0002057!9.65e-20!42;CL:0000738!5.15e-19!140;CL:0000860!1.90e-18!45;CL:0002031!2.16e-17!124;CL:0002087!3.37e-16!119;CL:0000763!1.01e-11!112;CL:0000049!1.01e-11!112;CL:0002032!2.40e-11!165;CL:0000837!2.40e-11!165;CL:0000037!2.80e-10!172;CL:0000566!2.80e-10!172;CL:0000988!3.28e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.49e-34;33!CL:0002057;2.49e-34;33!CL:0000473;5.58e-31;39!CL:0000234;5.58e-31;39!CL:0000576;2.62e-20;48!CL:0000766;7.72e-17;69!CL:0000763;9.91e-09;100!CL:0002087;2.38e-07;104!CL:0000738;8.10e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.81e-38,72;CL:0000473,5.61e-34,48;CL:0000234,5.61e-34,48;CL:0000557,2.96e-32,67;CL:0002009,5.26e-32,61;CL:0002194,8.00e-32,59;CL:0000576,8.00e-32,59;CL:0000040,8.00e-32,59;CL:0000559,8.00e-32,59;CL:0000839,2.75e-31,66;CL:0000860,2.91e-30,42;CL:0002057,2.91e-30,42;CL:0000738,9.06e-24,136;CL:0000763,6.28e-21,108;CL:0000049,6.28e-21,108;CL:0002031,1.68e-20,120;CL:0002087,3.98e-20,115;CL:0002032,6.76e-16,161;CL:0000837,6.76e-16,161;CL:0000037,8.45e-16,168;CL:0000988,1.60e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-22;42!CL:0000049;2.09e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-20!102;UBERON:0003061!1.17e-20!102;UBERON:0002193!1.17e-17!112;UBERON:0002371!5.92e-17!80;UBERON:0001474!2.45e-15!86;UBERON:0004765!4.97e-13!101;UBERON:0001434!4.97e-13!101;UBERON:0002405!1.27e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.26e-29,98;UBERON:0003061,5.26e-29,98;UBERON:0002371,2.25e-26,76;UBERON:0002193,1.54e-25,108;UBERON:0001474,3.32e-24,82;UBERON:0004765,1.71e-21,90;UBERON:0002405,2.24e-20,93;UBERON:0001434,9.89e-19,100;UBERON:0003081,4.62e-09,203 | |||
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| ||
|short_description=p7@LITAF | |||
}} | }} |
Latest revision as of 06:22, 20 September 2015
Short description: | p7@LITAF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LITAF_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 72bp_to_EU446689, EU831762, EU831840_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data