FFCP PHASE1:Hg19::chr16:11681023..11681097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_uc002dbc.2_5end | |association_with_transcript=5bp_to_uc002dbc.2_5end | ||
|cluster_id=chr16:11681023..11681097,- | |||
|description=CAGE_peak_3_at_LITAF_5end | |description=CAGE_peak_3_at_LITAF_5end | ||
|id=chr16:11681023..11681097,- | |id=chr16:11681023..11681097,- | ||
|ontology_enrichment_celltype=CL:0000766!1.16e-14!76;CL:0000738!2.77e-13!140;CL:0002087!1.35e-11!119;CL:0002031!1.83e-11!124;CL:0000557!1.91e-11!71;CL:0000839!9.11e-11!70;CL:0002194!1.10e-10!63;CL:0000576!1.10e-10!63;CL:0000040!1.10e-10!63;CL:0000559!1.10e-10!63;CL:0002009!1.17e-10!65;CL:0000860!3.74e-08!45;CL:0002057!9.41e-08!42;CL:0000791!3.04e-07!18;CL:0000789!3.04e-07!18;CL:0002420!3.04e-07!18;CL:0002419!3.04e-07!18;CL:0000790!3.04e-07!18;CL:0000625!6.24e-07!11 | |ontology_enrichment_celltype=CL:0000766!1.16e-14!76;CL:0000738!2.77e-13!140;CL:0002087!1.35e-11!119;CL:0002031!1.83e-11!124;CL:0000557!1.91e-11!71;CL:0000839!9.11e-11!70;CL:0002194!1.10e-10!63;CL:0000576!1.10e-10!63;CL:0000040!1.10e-10!63;CL:0000559!1.10e-10!63;CL:0002009!1.17e-10!65;CL:0000860!3.74e-08!45;CL:0002057!9.41e-08!42;CL:0000791!3.04e-07!18;CL:0000789!3.04e-07!18;CL:0002420!3.04e-07!18;CL:0002419!3.04e-07!18;CL:0000790!3.04e-07!18;CL:0000625!6.24e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.08e-10;39!CL:0000234;1.08e-10;39!CL:0000860;1.74e-09;33!CL:0002057;1.74e-09;33!CL:0000791;3.19e-07;18!CL:0000789;3.19e-07;18!CL:0002419;3.19e-07;18!CL:0000625;6.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.44e-14,72;CL:0000738,6.96e-13,136;CL:0002087,3.51e-11,115;CL:0000557,3.76e-11,67;CL:0002031,3.95e-11,120;CL:0000473,1.27e-10,48;CL:0000234,1.27e-10,48;CL:0000839,1.62e-10,66;CL:0002194,2.39e-10,59;CL:0000576,2.39e-10,59;CL:0000040,2.39e-10,59;CL:0000559,2.39e-10,59;CL:0002009,2.57e-10,61;CL:0000860,1.25e-07,42;CL:0002057,1.25e-07,42;CL:0000791,2.93e-07,18;CL:0000789,2.93e-07,18;CL:0002420,2.93e-07,18;CL:0002419,2.93e-07,18;CL:0000790,2.93e-07,18;CL:0000625,6.02e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.19e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-13!102;UBERON:0003061!2.37e-13!102;UBERON:0002193!1.53e-10!112;UBERON:0001474!2.07e-10!86;UBERON:0002371!2.48e-10!80;UBERON:0004765!2.24e-09!101;UBERON:0001434!2.24e-09!101;UBERON:0002405!2.92e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!2.37e-13!102;UBERON:0003061!2.37e-13!102;UBERON:0002193!1.53e-10!112;UBERON:0001474!2.07e-10!86;UBERON:0002371!2.48e-10!80;UBERON:0004765!2.24e-09!101;UBERON:0001434!2.24e-09!101;UBERON:0002405!2.92e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.56e-13,98;UBERON:0003061,4.56e-13,98;UBERON:0002193,3.33e-10,108;UBERON:0001474,3.96e-10,82;UBERON:0002371,4.67e-10,76;UBERON:0004765,6.18e-09,90;UBERON:0001434,9.77e-09,100;UBERON:0002405,1.76e-07,93 | |||
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| ||
|short_description=p3@LITAF | |short_description=p3@LITAF | ||
}} | }} |
Latest revision as of 06:38, 20 September 2015
Short description: | p3@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LITAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_uc002dbc.2_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.44e-14 | 72 |
leukocyte | 6.96e-13 | 136 |
nongranular leukocyte | 3.51e-11 | 115 |
granulocyte monocyte progenitor cell | 3.76e-11 | 67 |
hematopoietic lineage restricted progenitor cell | 3.95e-11 | 120 |
defensive cell | 1.27e-10 | 48 |
phagocyte | 1.27e-10 | 48 |
myeloid lineage restricted progenitor cell | 1.62e-10 | 66 |
monopoietic cell | 2.39e-10 | 59 |
monocyte | 2.39e-10 | 59 |
monoblast | 2.39e-10 | 59 |
promonocyte | 2.39e-10 | 59 |
macrophage dendritic cell progenitor | 2.57e-10 | 61 |
classical monocyte | 1.25e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-07 | 42 |
mature alpha-beta T cell | 2.93e-07 | 18 |
alpha-beta T cell | 2.93e-07 | 18 |
immature T cell | 2.93e-07 | 18 |
mature T cell | 2.93e-07 | 18 |
immature alpha-beta T cell | 2.93e-07 | 18 |
CD8-positive, alpha-beta T cell | 6.02e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.56e-13 | 98 |
blood island | 4.56e-13 | 98 |
hemolymphoid system | 3.33e-10 | 108 |
bone element | 3.96e-10 | 82 |
bone marrow | 4.67e-10 | 76 |
skeletal element | 6.18e-09 | 90 |
skeletal system | 9.77e-09 | 100 |
immune system | 1.76e-07 | 93 |