FFCP PHASE1:Hg19::chr4:106816291..106816313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255743 | |EntrezGene=255743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |HGNC=27405 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXI9 | |UniProt=Q6UXI9 | ||
|association_with_transcript=-280bp_to_ENST00000379987_5end | |association_with_transcript=-280bp_to_ENST00000379987_5end | ||
|cluster_id=chr4:106816291..106816313,+ | |||
|description=CAGE_peak_5_at_NPNT_5end | |description=CAGE_peak_5_at_NPNT_5end | ||
|id=chr4:106816291..106816313,+ | |id=chr4:106816291..106816313,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.04e-08!254 | |ontology_enrichment_celltype=CL:0000066!5.04e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.52e-07;2!CL:0000242;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.02e-13;1!UBERON:0006242;2.46e-12;1!UBERON:0008947;2.15e-09;29 | |||
|ontology_enrichment_disease=DOID:305!2.45e-16!106;DOID:0050687!6.20e-10!143;DOID:5093!6.34e-09!4;DOID:1612!6.34e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.02e-12;4!DOID:1612;2.02e-12;4!DOID:3151;2.46e-12;1!DOID:3149;2.46e-12;1!DOID:3451;8.52e-07;2!DOID:4159;8.52e-07;2!DOID:0060122;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.86e-12,4;DOID:1612,1.86e-12,4;DOID:3151,4.31e-12,1;DOID:3149,4.31e-12,1;DOID:305,3.67e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.83e-17!9;UBERON:0004119!5.28e-13!169;UBERON:0000925!5.28e-13!169;UBERON:0006595!5.28e-13!169;UBERON:0001007!7.07e-13!155;UBERON:0001555!7.07e-13!155;UBERON:0007026!7.07e-13!155;UBERON:0001557!1.03e-11!19;UBERON:0004921!1.40e-10!129;UBERON:0004185!1.40e-10!129;UBERON:0000065!1.72e-08!53;UBERON:0000077!3.85e-08!130;UBERON:0001004!4.72e-08!72;UBERON:0000481!9.03e-08!347;UBERON:0008947!1.40e-07!38;UBERON:0003258!1.40e-07!38;UBERON:0007023!2.77e-07!115;UBERON:0000062!4.75e-07!511 | |ontology_enrichment_uberon=UBERON:0001737!5.83e-17!9;UBERON:0004119!5.28e-13!169;UBERON:0000925!5.28e-13!169;UBERON:0006595!5.28e-13!169;UBERON:0001007!7.07e-13!155;UBERON:0001555!7.07e-13!155;UBERON:0007026!7.07e-13!155;UBERON:0001557!1.03e-11!19;UBERON:0004921!1.40e-10!129;UBERON:0004185!1.40e-10!129;UBERON:0000065!1.72e-08!53;UBERON:0000077!3.85e-08!130;UBERON:0001004!4.72e-08!72;UBERON:0000481!9.03e-08!347;UBERON:0008947!1.40e-07!38;UBERON:0003258!1.40e-07!38;UBERON:0007023!2.77e-07!115;UBERON:0000062!4.75e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.42e-20;9!UBERON:0001557;9.42e-20;9!UBERON:0002171;2.46e-12;1!UBERON:0006518;2.46e-12;1!UBERON:0008949;2.46e-12;1!UBERON:0000101;2.46e-12;1!UBERON:0002167;2.46e-12;1!UBERON:0002108;6.65e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.08e-20,9;UBERON:0002171,1.57e-12,1;UBERON:0006518,1.57e-12,1;UBERON:0008949,1.57e-12,1;UBERON:0000101,1.57e-12,1;UBERON:0002167,1.57e-12,1;UBERON:0002108,7.77e-10,4;UBERON:0001557,1.40e-09,19;UBERON:0008947,3.23e-07,38;UBERON:0003258,3.23e-07,38 | |||
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| ||
|short_description=p5@NPNT | |short_description=p5@NPNT | ||
}} | }} |
Latest revision as of 06:47, 20 September 2015
Short description: | p5@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NPNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -280bp_to_ENST00000379987_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | Q6UXI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.08e-20 | 9 |
lower lobe of right lung | 1.57e-12 | 1 |
right lung lobe | 1.57e-12 | 1 |
lower lobe of lung | 1.57e-12 | 1 |
lobe of lung | 1.57e-12 | 1 |
right lung | 1.57e-12 | 1 |
small intestine | 7.77e-10 | 4 |
upper respiratory tract | 1.40e-09 | 19 |
respiratory primordium | 3.23e-07 | 38 |
endoderm of foregut | 3.23e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.86e-12 | 4 |
breast cancer | 1.86e-12 | 4 |
skin squamous cell carcinoma | 4.31e-12 | 1 |
keratoacanthoma | 4.31e-12 | 1 |
carcinoma | 3.67e-09 | 106 |