FFCP PHASE1:Hg19::chr4:106833328..106833353,+: Difference between revisions
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|id=chr4:106833328..106833353,+
|short_description=p7@NPNT
|description=CAGE_peak_7_at_NPNT_5end
|association_with_transcript=0bp_to_ENST00000505821_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255743 | |EntrezGene=255743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |HGNC=27405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505821_5end | |||
|cluster_id=chr4:106833328..106833353,+ | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_7_at_NPNT_5end | |||
|id=chr4:106833328..106833353,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;5.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.82e-21;1!UBERON:0004874;6.98e-21;1!UBERON:0006965;1.82e-11;2!UBERON:0007297;3.89e-11;2!UBERON:0005795;6.93e-09;10!UBERON:0006603;1.52e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.43e-24!115;UBERON:0003101!1.04e-07!22;UBERON:0000079!1.04e-07!22;UBERON:0001737!7.99e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.82e-21;1!UBERON:0006834;2.82e-21;1!UBERON:0002146;2.82e-21;1!UBERON:0005623;2.82e-21;1!UBERON:0005795;6.98e-21;1!UBERON:0000989;6.98e-21;1!UBERON:0001301;6.98e-21;1!UBERON:0008811;6.98e-21;1!UBERON:0002081;2.47e-11;2!UBERON:0004175;3.70e-09;21!UBERON:0003133;2.52e-08;44!UBERON:0003135;4.34e-08;11!UBERON:0003978;5.54e-08;3!UBERON:0004151;5.54e-08;3!UBERON:0000946;5.54e-08;3!UBERON:0006947;7.50e-08;3!UBERON:0004054;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.88e-21,1;UBERON:0005623,1.88e-21,1;UBERON:0002079,2.30e-21,1;UBERON:0006834,3.45e-21,1;UBERON:0000989,5.16e-21,1;UBERON:0008811,5.16e-21,1;UBERON:0006258,5.16e-21,1;UBERON:0005876,5.16e-21,1;UBERON:0004874,5.16e-21,1;UBERON:0001301,6.31e-21,1;UBERON:0002081,2.23e-11,2;UBERON:0010227,2.23e-11,2;UBERON:0007023,8.11e-11,114;UBERON:0003133,2.05e-10,48;UBERON:0005795,9.43e-09,22;UBERON:0005156,1.73e-08,59;UBERON:0000990,1.73e-08,59;UBERON:0003135,4.04e-08,11;UBERON:0004876,4.04e-08,11;UBERON:0003978,4.84e-08,3;UBERON:0009751,4.84e-08,3;UBERON:0000946,4.84e-08,3;UBERON:0002523,4.84e-08,3;UBERON:0005983,4.84e-08,3;UBERON:0002165,4.84e-08,3;UBERON:0002062,4.84e-08,3;UBERON:0007280,4.84e-08,3;UBERON:0004151,5.18e-08,3;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3;UBERON:0004175,8.82e-08,25 | |||
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| ||
|short_description=p7@NPNT | |||
}} | }} |
Latest revision as of 06:55, 20 September 2015
Short description: | p7@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NPNT_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | 0bp_to_ENST00000505821_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.88e-21 | 1 |
semi-lunar valve | 1.88e-21 | 1 |
left cardiac atrium | 2.30e-21 | 1 |
uterus or analog | 3.45e-21 | 1 |
penis | 5.16e-21 | 1 |
intromittent organ | 5.16e-21 | 1 |
lateral plate mesenchyme | 5.16e-21 | 1 |
undifferentiated genital tubercle | 5.16e-21 | 1 |
somatopleure | 5.16e-21 | 1 |
epididymis | 6.31e-21 | 1 |
cardiac atrium | 2.23e-11 | 2 |
future cardiac atrium | 2.23e-11 | 2 |
adult organism | 8.11e-11 | 114 |
reproductive organ | 2.05e-10 | 48 |
embryonic uterus | 9.43e-09 | 22 |
reproductive structure | 1.73e-08 | 59 |
reproductive system | 1.73e-08 | 59 |
male reproductive organ | 4.04e-08 | 11 |
urogenital ridge | 4.04e-08 | 11 |
valve | 4.84e-08 | 3 |
cardiac mesenchyme | 4.84e-08 | 3 |
cardial valve | 4.84e-08 | 3 |
tunica intima | 4.84e-08 | 3 |
heart layer | 4.84e-08 | 3 |
endocardium | 4.84e-08 | 3 |
endocardial cushion | 4.84e-08 | 3 |
presumptive endocardium | 4.84e-08 | 3 |
cardiac chamber | 5.18e-08 | 3 |
male genital duct | 7.26e-08 | 3 |
internal male genitalia | 7.26e-08 | 3 |
internal genitalia | 8.82e-08 | 25 |