FFCP PHASE1:Hg19::chrX:18372792..18372822,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:18372792..18372822,-
|short_description=p1@SCML2
|description=CAGE_peak_1_at_SCML2_5end
|association_with_transcript=0bp_to_ENST00000442000_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10389 | |EntrezGene=10389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10581 | |HGNC=10581 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZR9 | |UniProt=B4DZR9 | ||
|association_with_transcript=0bp_to_ENST00000442000_5end | |||
|cluster_id=chrX:18372792..18372822,- | |||
|description=CAGE_peak_1_at_SCML2_5end | |||
|id=chrX:18372792..18372822,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.33e-08;29 | |||
|ontology_enrichment_disease=DOID:162!1.08e-25!235;DOID:14566!2.40e-25!239;DOID:0050687!8.77e-22!143;DOID:305!7.74e-16!106;DOID:0050686!5.03e-11!137;DOID:8692!4.81e-09!31;DOID:1240!1.21e-07!39;DOID:3095!1.44e-07!22;DOID:2994!1.44e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.16e-10;31!DOID:1240;4.26e-08;39!DOID:3095;4.56e-08;22!DOID:2994;4.56e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.44e-28,235;DOID:14566,4.76e-28,239;DOID:0050687,2.40e-23,143;DOID:305,9.28e-17,106;DOID:0050686,4.81e-12,137;DOID:8692,2.75e-10,31;DOID:1240,2.17e-09,39;DOID:3095,7.48e-08,22;DOID:2994,7.48e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.36e-08!94;UBERON:0001016!7.36e-08!94;UBERON:0001017!7.47e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.22e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.68e-08,89;UBERON:0011216,1.07e-07,223 | |||
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| ||
|short_description=p1@SCML2 | |||
}} | }} |
Latest revision as of 07:08, 20 September 2015
Short description: | p1@SCML2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCML2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000442000_5end |
EntrezGene: | SCML2 |
HGNC: | 10581 |
UniProt: | B4DZR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 9.68e-08 | 89 |
organ system subdivision | 1.07e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.44e-28 | 235 |
disease of cellular proliferation | 4.76e-28 | 239 |
cell type cancer | 2.40e-23 | 143 |
carcinoma | 9.28e-17 | 106 |
organ system cancer | 4.81e-12 | 137 |
myeloid leukemia | 2.75e-10 | 31 |
leukemia | 2.17e-09 | 39 |
germ cell and embryonal cancer | 7.48e-08 | 22 |
germ cell cancer | 7.48e-08 | 22 |