FFCP PHASE1:Hg19::chr17:39942327..39942355,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:39942327..39942355,-
|short_description=p4@JUP
|description=CAGE_peak_4_at_JUP_5end
|association_with_transcript=-5bp_to_ENST00000449889_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKY1 | |UniProt=C9JKY1 | ||
|association_with_transcript=-5bp_to_ENST00000449889_5end | |||
|cluster_id=chr17:39942327..39942355,- | |||
|description=CAGE_peak_4_at_JUP_5end | |||
|id=chr17:39942327..39942355,- | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-20!254;CL:0002078!5.70e-12!44;CL:0000222!1.49e-11!119;CL:0000115!2.61e-11!35;CL:0000220!3.74e-10!246;CL:0002139!6.28e-10!24;CL:0002321!6.48e-10!248;CL:0000012!1.91e-09!682;CL:0000076!6.59e-09!62;CL:0000548!6.89e-09!679;CL:0000004!6.89e-09!679;CL:0000255!6.89e-09!679;CL:0000213!2.23e-08!57;CL:0000215!2.23e-08!57;CL:0000071!7.16e-08!18;CL:0002546!7.16e-08!18;CL:0000359!9.27e-08!32;CL:0002076!2.62e-07!43;CL:1000449!2.82e-07!16;CL:1000497!4.09e-07!18;CL:0002518!4.09e-07!18;CL:0000192!5.33e-07!42;CL:0000514!5.33e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.52e-12;24!CL:0000115;1.70e-11;36!CL:0002078;4.04e-10;45!CL:1000449;5.88e-10;15!CL:0000071;1.99e-09;18!CL:1000497;6.03e-09;17!CL:0002518;6.03e-09;17!CL:0002681;1.11e-08;12!CL:0002584;1.11e-08;12!CL:0000359;1.34e-07;32!CL:0000213;2.95e-07;58!CL:0000215;2.95e-07;58!CL:1000507;6.84e-07;10!CL:1000494;6.84e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-19,253;CL:0002078,6.59e-15,45;CL:0000115,4.52e-14,36;CL:0002139,5.50e-12,24;CL:0000222,5.63e-12,121;CL:0000213,1.72e-10,58;CL:0000215,1.72e-10,58;CL:1000449,4.39e-10,15;CL:0000071,1.99e-09,18;CL:0002546,1.99e-09,18;CL:0002321,2.90e-09,250;CL:1000497,5.13e-09,17;CL:0002518,5.13e-09,17;CL:0002681,8.80e-09,12;CL:0002584,8.80e-09,12;CL:0000076,3.36e-08,63;CL:0000359,9.75e-08,32;CL:1000507,7.15e-07,10;CL:1000494,7.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;1.99e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.45e-16!79;UBERON:0007798!1.45e-16!79;UBERON:0000055!2.42e-14!69;UBERON:0001981!8.54e-14!60;UBERON:0007500!8.54e-14!60;UBERON:0004537!8.54e-14!60;UBERON:0006965!8.54e-14!60;UBERON:0003914!3.88e-13!118;UBERON:0004872!5.44e-12!84;UBERON:0001009!3.90e-11!113;UBERON:0001637!6.19e-11!42;UBERON:0003509!6.19e-11!42;UBERON:0004572!6.19e-11!42;UBERON:0004535!1.64e-10!110;UBERON:0003081!3.65e-09!216;UBERON:0001008!1.77e-08!45;UBERON:0006554!2.07e-08!44;UBERON:0001986!7.16e-08!18;UBERON:0004638!7.16e-08!18;UBERON:0004852!7.16e-08!18;UBERON:0000926!8.78e-08!448;UBERON:0004120!8.78e-08!448;UBERON:0006603!8.78e-08!448;UBERON:0000477!1.39e-07!286;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0003104!2.29e-07!238;UBERON:0009142!2.29e-07!238;UBERON:0004211!2.82e-07!16;UBERON:0001285!2.82e-07!16;UBERON:0007684!2.82e-07!16;UBERON:0003220!2.82e-07!16;UBERON:0004208!2.82e-07!16;UBERON:0000490!3.46e-07!138;UBERON:0003064!5.05e-07!37;UBERON:0006555!5.78e-07!17;UBERON:0005103!5.78e-07!17;UBERON:0000083!5.78e-07!17;UBERON:0009201!5.78e-07!17;UBERON:0004819!5.78e-07!17;UBERON:0006553!5.78e-07!17;UBERON:0003074!5.78e-07!17;UBERON:0003060!5.78e-07!17;UBERON:0003103!6.38e-07!69;UBERON:0000467!7.71e-07!625;UBERON:0001004!8.37e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.88e-10;15!UBERON:0004819;5.88e-10;15!UBERON:0001285;5.88e-10;15!UBERON:0007684;5.88e-10;15!UBERON:0003914;1.69e-09;74!UBERON:0004638;1.99e-09;18!UBERON:0001986;1.99e-09;18!UBERON:0004852;1.99e-09;18!UBERON:0001637;6.92e-09;42!UBERON:0003509;6.92e-09;42!UBERON:0004572;6.92e-09;42!UBERON:0006554;7.11e-09;30!UBERON:0001008;7.11e-09;30!UBERON:0000353;1.07e-08;15!UBERON:0001225;1.11e-08;12!UBERON:0008987;1.11e-08;12!UBERON:0002049;6.91e-08;75!UBERON:0007798;6.91e-08;75!UBERON:0000490;8.05e-08;33!UBERON:0007500;1.06e-07;56!UBERON:0001981;1.06e-07;56!UBERON:0004537;1.06e-07;56!UBERON:0000487;1.12e-07;22!UBERON:0001737;1.22e-07;9!UBERON:0001557;1.22e-07;9!UBERON:0000055;4.36e-07;65!UBERON:0001851;4.84e-07;15!UBERON:0006914;6.77e-07;25!UBERON:0004211;6.84e-07;10!UBERON:0009773;6.84e-07;10!UBERON:0001231;6.84e-07;10!UBERON:0004810;6.84e-07;10!UBERON:0000025;9.36e-07;93 | |||
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| ||
|short_description=p4@JUP | |||
}} | }} |
Latest revision as of 07:18, 20 September 2015
Short description: | p4@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JUP_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000449889_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9JKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-19 | 253 |
meso-epithelial cell | 6.59e-15 | 45 |
endothelial cell | 4.52e-14 | 36 |
endothelial cell of vascular tree | 5.50e-12 | 24 |
mesodermal cell | 5.63e-12 | 121 |
lining cell | 1.72e-10 | 58 |
barrier cell | 1.72e-10 | 58 |
epithelial cell of nephron | 4.39e-10 | 15 |
blood vessel endothelial cell | 1.99e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.99e-09 | 18 |
embryonic cell | 2.90e-09 | 250 |
kidney cell | 5.13e-09 | 17 |
kidney epithelial cell | 5.13e-09 | 17 |
kidney cortical cell | 8.80e-09 | 12 |
renal cortical epithelial cell | 8.80e-09 | 12 |
squamous epithelial cell | 3.36e-08 | 63 |
vascular associated smooth muscle cell | 9.75e-08 | 32 |
kidney tubule cell | 7.15e-07 | 10 |
nephron tubule epithelial cell | 7.15e-07 | 10 |