FFCP PHASE1:Hg19::chr6:125550179..125550191,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12006 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000532423_5end | |||
|cluster_id=chr6:125550179..125550191,+ | |||
|coexpression_cluster_id=C495 | |||
|description=CAGE_peak_20_at_TPD52L1_5end | |||
|id=chr6:125550179..125550191,+ | |||
|ontology_enrichment_celltype=CL:0002615!1.11e-10!3;CL:0002580!1.74e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.33e-23;1!CL:0002625;1.33e-23;1!CL:0000216;1.33e-23;1!CL:0002591;3.67e-23;1!CL:0002616;3.67e-23;1!CL:0002615;1.26e-08;3!CL:0000136;1.05e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.34e-23,1;CL:0002625,1.34e-23,1;CL:0000216,1.34e-23,1;CL:0002616,2.10e-23,1;CL:0002591,4.10e-23,1;CL:0002615,1.51e-08,3;CL:0000136,8.58e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.67e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.16e-13!6;UBERON:0002358!3.16e-13!6;UBERON:0003684!3.16e-13!6;UBERON:0001178!3.16e-13!6;UBERON:0007023!5.35e-11!115;UBERON:0001896!1.67e-09!3;UBERON:0005290!1.67e-09!3;UBERON:0010096!1.67e-09!3;UBERON:0004457!5.06e-09!12;UBERON:0000042!5.06e-09!12;UBERON:0002298!5.35e-09!8;UBERON:0002346!2.81e-07!90;UBERON:0003075!6.91e-07!86;UBERON:0007284!6.91e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.33e-23;1!UBERON:0001343;1.33e-23;1!UBERON:0004910;1.33e-23;1!UBERON:0004813;1.33e-23;1!UBERON:0004909;1.65e-12;2!UBERON:0000078;2.74e-12;2!UBERON:0002012;2.74e-12;2!UBERON:0005406;2.74e-12;2!UBERON:0008886;2.74e-12;2!UBERON:0005904;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.34e-23,1;UBERON:0001343,1.34e-23,1;UBERON:0004910,1.34e-23,1;UBERON:0005154,1.34e-23,1;UBERON:0005295,1.34e-23,1;UBERON:0004813,1.34e-23,1;UBERON:0005297,1.34e-23,1;UBERON:0005294,1.34e-23,1;UBERON:0010141,1.34e-23,1;UBERON:0005891,1.34e-23,1;UBERON:0004909,1.65e-12,2;UBERON:0005406,2.07e-12,2;UBERON:0000078,2.90e-12,2;UBERON:0007497,2.90e-12,2;UBERON:0003643,2.90e-12,2;UBERON:0003504,2.90e-12,2;UBERON:0003469,2.90e-12,2;UBERON:0003496,2.90e-12,2;UBERON:0002012,2.90e-12,2;UBERON:0008886,2.90e-12,2;UBERON:0007303,2.90e-12,2;UBERON:0002061,2.90e-12,2;UBERON:0005432,2.90e-12,2;UBERON:0004363,2.90e-12,2;UBERON:0004145,1.30e-08,3;UBERON:0005904,6.87e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,1.10391690523754,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33763907334625,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35535298446752,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | |||
|short_description=p20@TPD52L1 | |||
}} |
Latest revision as of 07:29, 20 September 2015
Short description: | p20@TPD52L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TPD52L1_5end |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | -21bp_to_ENST00000532423_5end |
EntrezGene: | TPD52L1 |
HGNC: | 12006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.34e-23 | 1 |
seminiferous tubule epithelial cell | 1.34e-23 | 1 |
Sertoli cell | 1.34e-23 | 1 |
perirenal adipocyte cell | 2.10e-23 | 1 |
smooth muscle cell of the pulmonary artery | 4.10e-23 | 1 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
fat cell | 8.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.34e-23 | 1 |
seminiferous tubule of testis | 1.34e-23 | 1 |
epithelium of male gonad | 1.34e-23 | 1 |
epithelial cord | 1.34e-23 | 1 |
sex cord | 1.34e-23 | 1 |
seminiferous tubule epithelium | 1.34e-23 | 1 |
testis sex cord | 1.34e-23 | 1 |
genital ridge | 1.34e-23 | 1 |
primitive sex cord of indifferent gonad | 1.34e-23 | 1 |
coelomic epithelium | 1.34e-23 | 1 |
epithelium of gonad | 1.65e-12 | 2 |
perirenal fat | 2.07e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.90e-12 | 2 |
developing epithelial placode | 2.90e-12 | 2 |
respiratory system arterial blood vessel | 2.90e-12 | 2 |
respiratory system blood vessel | 2.90e-12 | 2 |
respiratory system artery | 2.90e-12 | 2 |
head blood vessel | 2.90e-12 | 2 |
pulmonary artery | 2.90e-12 | 2 |
pulmonary vascular system | 2.90e-12 | 2 |
pharyngeal vasculature | 2.90e-12 | 2 |
truncus arteriosus | 2.90e-12 | 2 |
aortic sac | 2.90e-12 | 2 |
pharyngeal arch artery | 2.90e-12 | 2 |
outflow tract | 1.30e-08 | 3 |
duct of male reproductive system | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.61e-07 | 4 |