FFCP PHASE1:Hg19::chr16:1203194..1203207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8912 | |EntrezGene=8912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1395 | |HGNC=1395 | ||
|TSSclassifier=strong | |||
|UniProt=O95180,B3KQH9 | |UniProt=O95180,B3KQH9 | ||
|association_with_transcript=-33bp_to_ENST00000348261,ENST00000358590,NM_001005407,NM_021098,uc002cks.2,uc002ckt.2_5end | |association_with_transcript=-33bp_to_ENST00000348261,ENST00000358590,NM_001005407,NM_021098,uc002cks.2,uc002ckt.2_5end | ||
|cluster_id=chr16:1203194..1203207,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_CACNA1H_5end | |description=CAGE_peak_3_at_CACNA1H_5end | ||
|id=chr16:1203194..1203207,+ | |id=chr16:1203194..1203207,+ | ||
|ontology_enrichment_celltype=CL:0000511!9.92e-13!1;CL:0002625!9.92e-13!1;CL:0000216!9.92e-13!1;CL:0000154!1.67e-08!6;CL:0000317!5.73e-07!2;CL:1000448!5.73e-07!2;CL:0002308!5.73e-07!2;CL:0002140!5.73e-07!2;CL:0002363!6.42e-07!2;CL:0000008!6.42e-07!2 | |ontology_enrichment_celltype=CL:0000511!9.92e-13!1;CL:0002625!9.92e-13!1;CL:0000216!9.92e-13!1;CL:0000154!1.67e-08!6;CL:0000317!5.73e-07!2;CL:1000448!5.73e-07!2;CL:0002308!5.73e-07!2;CL:0002140!5.73e-07!2;CL:0002363!6.42e-07!2;CL:0000008!6.42e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000511;6.58e-50;1!CL:0002625;6.58e-50;1!CL:0000216;6.58e-50;1!CL:0000154;1.57e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.58e-50,1;CL:0002625,6.58e-50,1;CL:0000216,6.58e-50,1;CL:0000154,1.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.79e-13!8;UBERON:0001136!9.92e-13!1;UBERON:0001343!9.92e-13!1;UBERON:0004910!9.92e-13!1;UBERON:0005154!9.92e-13!1;UBERON:0005295!9.92e-13!1;UBERON:0004813!9.92e-13!1;UBERON:0005297!9.92e-13!1;UBERON:0005294!9.92e-13!1;UBERON:0010141!9.92e-13!1;UBERON:0005891!9.92e-13!1;UBERON:0003135!5.99e-10!11;UBERON:0003101!1.84e-08!22;UBERON:0000079!1.84e-08!22;UBERON:0004122!3.36e-07!15;UBERON:0004909!5.41e-07!2;UBERON:0002419!5.73e-07!2;UBERON:0007771!5.73e-07!2;UBERON:0003297!5.73e-07!2;UBERON:0001821!5.73e-07!2;UBERON:0003487!5.73e-07!2;UBERON:0001820!5.73e-07!2;UBERON:0005089!5.73e-07!2;UBERON:0005088!5.73e-07!2;UBERON:0003566!6.42e-07!2;UBERON:0001777!6.42e-07!2;UBERON:0000341!6.80e-07!2;UBERON:0002360!7.20e-07!2;UBERON:0000094!7.20e-07!2;UBERON:0007645!7.20e-07!2;UBERON:0001255!9.54e-07!2;UBERON:0001556!9.54e-07!2 | |ontology_enrichment_uberon=UBERON:0000473!1.79e-13!8;UBERON:0001136!9.92e-13!1;UBERON:0001343!9.92e-13!1;UBERON:0004910!9.92e-13!1;UBERON:0005154!9.92e-13!1;UBERON:0005295!9.92e-13!1;UBERON:0004813!9.92e-13!1;UBERON:0005297!9.92e-13!1;UBERON:0005294!9.92e-13!1;UBERON:0010141!9.92e-13!1;UBERON:0005891!9.92e-13!1;UBERON:0003135!5.99e-10!11;UBERON:0003101!1.84e-08!22;UBERON:0000079!1.84e-08!22;UBERON:0004122!3.36e-07!15;UBERON:0004909!5.41e-07!2;UBERON:0002419!5.73e-07!2;UBERON:0007771!5.73e-07!2;UBERON:0003297!5.73e-07!2;UBERON:0001821!5.73e-07!2;UBERON:0003487!5.73e-07!2;UBERON:0001820!5.73e-07!2;UBERON:0005089!5.73e-07!2;UBERON:0005088!5.73e-07!2;UBERON:0003566!6.42e-07!2;UBERON:0001777!6.42e-07!2;UBERON:0000341!6.80e-07!2;UBERON:0002360!7.20e-07!2;UBERON:0000094!7.20e-07!2;UBERON:0007645!7.20e-07!2;UBERON:0001255!9.54e-07!2;UBERON:0001556!9.54e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.52e-56;8!UBERON:0001136;6.58e-50;1!UBERON:0001343;6.58e-50;1!UBERON:0004910;6.58e-50;1!UBERON:0004813;6.58e-50;1!UBERON:0003135;4.67e-41;11!UBERON:0004909;9.18e-26;2!UBERON:0000991;4.76e-22;21!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0005904;1.29e-13;4!UBERON:0002323;2.66e-08;45!UBERON:0003133;4.05e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.52e-56,8;UBERON:0001136,6.58e-50,1;UBERON:0001343,6.58e-50,1;UBERON:0004910,6.58e-50,1;UBERON:0005154,6.58e-50,1;UBERON:0005295,6.58e-50,1;UBERON:0004813,6.58e-50,1;UBERON:0005297,6.58e-50,1;UBERON:0005294,6.58e-50,1;UBERON:0010141,6.58e-50,1;UBERON:0005891,6.58e-50,1;UBERON:0003135,4.67e-41,11;UBERON:0004909,9.18e-26,2;UBERON:0000991,4.76e-22,21;UBERON:0009196,4.76e-22,21;UBERON:0009117,4.76e-22,21;UBERON:0005564,4.76e-22,21;UBERON:0004176,4.27e-21,22;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0005904,1.29e-13,4;UBERON:0002323,1.35e-10,46;UBERON:0003133,3.42e-10,48;UBERON:0004458,5.30e-10,49;UBERON:0003886,3.71e-09,54;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0002553,3.34e-08,61;UBERON:0004871,1.80e-07,8 | |||
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|short_description=p3@CACNA1H | |short_description=p3@CACNA1H | ||
}} | }} |
Latest revision as of 07:40, 20 September 2015
Short description: | p3@CACNA1H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNA1H_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -33bp_to_ENST00000348261, ENST00000358590, NM_001005407, NM_021098, uc002cks.2, uc002ckt.2_5end |
EntrezGene: | CACNA1H |
HGNC: | 1395 |
UniProt: | O95180B3KQH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.58e-50 | 1 |
seminiferous tubule epithelial cell | 6.58e-50 | 1 |
Sertoli cell | 6.58e-50 | 1 |
protein secreting cell | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 5.52e-56 | 8 |
mesothelium | 6.58e-50 | 1 |
seminiferous tubule of testis | 6.58e-50 | 1 |
epithelium of male gonad | 6.58e-50 | 1 |
epithelial cord | 6.58e-50 | 1 |
sex cord | 6.58e-50 | 1 |
seminiferous tubule epithelium | 6.58e-50 | 1 |
testis sex cord | 6.58e-50 | 1 |
genital ridge | 6.58e-50 | 1 |
primitive sex cord of indifferent gonad | 6.58e-50 | 1 |
coelomic epithelium | 6.58e-50 | 1 |
male reproductive organ | 4.67e-41 | 11 |
epithelium of gonad | 9.18e-26 | 2 |
gonad | 4.76e-22 | 21 |
indifferent external genitalia | 4.76e-22 | 21 |
indifferent gonad | 4.76e-22 | 21 |
gonad primordium | 4.76e-22 | 21 |
external genitalia | 4.27e-21 | 22 |
male organism | 4.27e-21 | 22 |
male reproductive system | 4.27e-21 | 22 |
duct of male reproductive system | 1.29e-13 | 4 |
body cavity | 1.35e-10 | 46 |
reproductive organ | 3.42e-10 | 48 |
body cavity or lining | 5.30e-10 | 49 |
body cavity precursor | 3.71e-09 | 54 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
anatomical cavity | 3.34e-08 | 61 |
somatic layer of lateral plate mesoderm | 1.80e-07 | 8 |