FFCP PHASE1:Hg19::chr6:126240356..126240379,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135112 | |EntrezGene=135112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21081 | |HGNC=21081 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3C8,Q8NI08 | |UniProt=Q8N3C8,Q8NI08 | ||
|association_with_transcript=0bp_to_NM_001199622_5end | |association_with_transcript=0bp_to_NM_001199622_5end | ||
|cluster_id=chr6:126240356..126240379,+ | |||
|coexpression_cluster_id=C1532 | |coexpression_cluster_id=C1532 | ||
|description=CAGE_peak_7_at_NCOA7_5end | |description=CAGE_peak_7_at_NCOA7_5end | ||
|id=chr6:126240356..126240379,+ | |id=chr6:126240356..126240379,+ | ||
|ontology_enrichment_celltype=CL:0000077;1.53e-07;19 | |ontology_enrichment_celltype=CL:0000066!8.19e-13!254;CL:0000223!5.32e-08!59;CL:0000077!2.72e-07!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;1.53e-07;19 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,4.55e-15,253;CL:0000223,6.69e-09,58;CL:0000077,1.28e-07,19 | ||
|ontology_enrichment_uberon=UBERON:0001737;1.22e-10;9!UBERON:0001557;1.22e-10;9!UBERON:0002423;4.05e-07;25!UBERON:0005631;7.58e-07;10!UBERON:0000158;7.58e-07;10 | |ontology_enrichment_development_v019=UBERON:0008947;1.43e-10;29!UBERON:0006595;9.27e-09;86!UBERON:0001041;3.86e-07;30 | ||
|ontology_enrichment_disease=DOID:305!1.52e-12!106;DOID:162!3.47e-08!235;DOID:0050687!1.15e-07!143;DOID:14566!1.56e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.32e-15,106;DOID:0050687,3.10e-10,143;DOID:162,3.59e-08,235;DOID:14566,1.51e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.02e-22!169;UBERON:0000925!7.02e-22!169;UBERON:0006595!7.02e-22!169;UBERON:0001007!1.87e-19!155;UBERON:0001555!1.87e-19!155;UBERON:0007026!1.87e-19!155;UBERON:0004921!1.36e-17!129;UBERON:0004185!1.36e-17!129;UBERON:0000077!5.87e-15!130;UBERON:0001041!1.07e-11!98;UBERON:0005911!6.71e-10!82;UBERON:0005409!3.74e-08!35;UBERON:0003929!8.54e-08!54;UBERON:0001737!1.20e-07!9;UBERON:0000160!2.13e-07!27;UBERON:0001048!4.25e-07!168;UBERON:0000062!4.95e-07!511;UBERON:0001557!5.87e-07!19;UBERON:0000065!7.53e-07!53;UBERON:0000926!9.03e-07!448;UBERON:0004120!9.03e-07!448;UBERON:0006603!9.03e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.22e-10;9!UBERON:0001557;1.22e-10;9!UBERON:0002423;4.05e-07;25!UBERON:0005631;7.58e-07;10!UBERON:0000158;7.58e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.58e-20,160;UBERON:0000925,2.58e-20,160;UBERON:0006595,2.58e-20,160;UBERON:0001007,2.20e-17,145;UBERON:0001555,2.20e-17,145;UBERON:0007026,2.20e-17,145;UBERON:0004921,1.19e-15,118;UBERON:0001737,1.39e-10,9;UBERON:0001041,2.31e-10,87;UBERON:0005911,1.30e-09,82;UBERON:0001557,1.12e-08,19;UBERON:0001004,1.17e-08,74;UBERON:0000065,1.43e-08,54;UBERON:0005631,1.84e-08,14;UBERON:0000158,1.84e-08,14;UBERON:0008947,2.58e-07,38;UBERON:0003258,2.58e-07,38;UBERON:0003929,3.46e-07,54;UBERON:0009497,5.08e-07,25;UBERON:0000015,5.08e-07,25;UBERON:0002423,5.08e-07,25;UBERON:0006235,5.08e-07,25;UBERON:0004161,5.08e-07,25;UBERON:0009856,7.50e-07,26 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,4.42321085702716,0.697801167972428,8.08233076881637,3.16520373874144,0,0,0.672325146451775,0.602694528023977,0,2.43966399395253,0,0,0,0,0.136874425072884,0.125542639594803,2.44522898393444,2.62721886239826,2.12519109546934,0,0.767658796194425,0,0,0.30120591877825,0.369754010166788,0,0,2.93600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,7.19230980805376,4.35473201099471,7.80391358632331,2.75796544589295,1.93645405075148,1.35426486594342,0,0,0,6.12167784741805,3.53021929783703,5.75403413219137,0.989553900560148,2.19410023383795,2.13112375266347,15.381089647315,1.13477044938228,6.22822248995575,4.52247597462138,4.17186334736161,8.03598725408932,24.2159801053348,13.6262725315399,25.3169909952708,0.211255286311942,0,0.419317291016752,0.44931452458598,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.68152568894461,1.05353633910031,0.393419540227666,0.393010762749165,0.822405995998037,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0.670700859703636,1.15076305659177,0.361439152384566,0,0,0,0,0.945348171640679,0.221729397462564,0.263504357079378,0.654895377488563,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.208994966536811,0,0.35576626268671,1.67360306382335,0,0,0.24406205754817,0.367663080345869,2.43042584364528,0,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0.286836620748814,0.354668382198357,4.48542080113846,4.2699598291882,2.96001058100592,0,1.88594940897563,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,1.48360157567134,0,0.718618141816238,0,0,0.277064115484183,0,0,0.45071417671979,3.85669422744072,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0.323292113637624,0,0,0.508681776931463,2.12586938479627,3.00020732649918,2.86804595389004,0,0,0.116193942869518,0,0,0,4.69348596989448,0,0,0,0,15.0249636050602,14.6668680367948,10.3634742849897,16.5440959098591,18.3018733037621,14.710778384888,12.6741429670555,10.0072947213927,10.0034260806062,0,0,0.4115740113314,0,10.1404027857465,22.6050259835854,4.13552934676983,0,6.64137568132813,0.514703430895577,0.219500570817251,1.1240175325762,1.3068766413512,6.29601427078001,0.651616610620649,0,0,0.115930404975077,1.17408694235822,1.58803092537181,1.85194205030644,1.71228737011138,0,0,0.246217006087397,0,0.297262324577456,3.74935335947108,2.35174979478403,4.11147782002921,2.23896306757121,2.61570544662566,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,1.32969058292435,1.04007436911366,0,0,0,0.428933980974443,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.904318131178758,8.71533458600294,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0,0,0.591092280605782,0,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0.271265023699736,2.07970861530807,0.892144943985809,3.78485796081443,1.05427273493442,0,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0,0,0,0.215714200818617,0.106727557803444,3.33440328590885,1.66435439510497,3.32629322662648,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.771048469013278,0,0.164254312027618,1.03850885836724,0.116210378459959,5.07609688284813,0.200506470303285,0.368323955743585,1.49258782613989,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0.844413031143006,0,0,1.94324324491925,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0.261435451024901,0,0,0,1.95777922130672,0,0,0.574265537996172,3.25030123018261,1.6068392984416,0.096670718292122,0.462145851343933,0.460511024178389,0,0.214840489736547,0.290033387828457,0,0.0890320356467374,3.30569830721956,1.53752053892085,1.65896526242959,1.31505115112215,0,0.31481234683064,0,4.62050370264133,0,0,1.48259375283136,5.00937103596969,0,0.949138274156178,0.571890581771475,0,0,0,2.35484592059769,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,20.2282196393966,0,0,1.1312434556297,0,0.551365343546124,1.32687795048244,3.94605796728386,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0.577332676353072,0,0,2.91845782408015,0,1.68471475667626,0.443430153536676,1.60806380144872,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,1.47024129588619,0,0,0,0.318852545457645,0,1.34053759092657,0.423347165447766,0.973865820823666,1.40398589056729,0.228234679033192,1.41011906195721,0,0.338583555603207,0,0.201799707191048,0,0.343505344755765,0.614481528616916,0.894704431569664,1.33479313369527,0.781552381608161,0,0,5.95002492647163,0.33307196799782,1.4098700508785,5.42707567183837,1.75809815126273,0,0,0,1.43246690842614,16.92698680746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| ||
|short_description=p7@NCOA7 | |short_description=p7@NCOA7 | ||
}} | }} |
Latest revision as of 07:54, 20 September 2015
Short description: | p7@NCOA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NCOA7_5end |
Coexpression cluster: | C1532_CD14_serous_clear_pharyngeal_epidermoid_large_glassy |
Association with transcript: | 0bp_to_NM_001199622_5end |
EntrezGene: | NCOA7 |
HGNC: | 21081 |
UniProt: | Q8N3C8Q8NI08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.55e-15 | 253 |
endodermal cell | 6.69e-09 | 58 |
mesothelial cell | 1.28e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.58e-20 | 160 |
endoderm | 2.58e-20 | 160 |
presumptive endoderm | 2.58e-20 | 160 |
digestive system | 2.20e-17 | 145 |
digestive tract | 2.20e-17 | 145 |
primitive gut | 2.20e-17 | 145 |
subdivision of digestive tract | 1.19e-15 | 118 |
larynx | 1.39e-10 | 9 |
foregut | 2.31e-10 | 87 |
endo-epithelium | 1.30e-09 | 82 |
upper respiratory tract | 1.12e-08 | 19 |
respiratory system | 1.17e-08 | 74 |
respiratory tract | 1.43e-08 | 54 |
extraembryonic membrane | 1.84e-08 | 14 |
membranous layer | 1.84e-08 | 14 |
respiratory primordium | 2.58e-07 | 38 |
endoderm of foregut | 2.58e-07 | 38 |
gut epithelium | 3.46e-07 | 54 |
epithelium of foregut-midgut junction | 5.08e-07 | 25 |
anatomical boundary | 5.08e-07 | 25 |
hepatobiliary system | 5.08e-07 | 25 |
foregut-midgut junction | 5.08e-07 | 25 |
septum transversum | 5.08e-07 | 25 |
sac | 7.50e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.32e-15 | 106 |
cell type cancer | 3.10e-10 | 143 |
cancer | 3.59e-08 | 235 |
disease of cellular proliferation | 1.51e-07 | 239 |