FFCP PHASE1:Hg19::chr17:40556968..40557001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284119 | |EntrezGene=284119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9688 | |HGNC=9688 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NZI2 | |UniProt=Q6NZI2 | ||
|association_with_transcript=308bp_to_BC004295_5end | |association_with_transcript=308bp_to_BC004295_5end | ||
|cluster_id=chr17:40556968..40557001,- | |||
|description=CAGE_peak_7_at_PTRF_5end | |description=CAGE_peak_7_at_PTRF_5end | ||
|id=chr17:40556968..40557001,- | |id=chr17:40556968..40557001,- | ||
|ontology_enrichment_celltype=CL:0000055!1.13e-22!180;CL:0000222!2.52e-15!119;CL:0000057!2.77e-13!75;CL:0000220!6.68e-13!246;CL:0002321!8.80e-13!248;CL:0000680!1.20e-08!57;CL:0000056!1.20e-08!57;CL:0000355!1.20e-08!57;CL:0000136!1.79e-08!15;CL:0000213!2.29e-08!57;CL:0000215!2.29e-08!57;CL:0000187!5.24e-08!54;CL:0000192!1.68e-07!42;CL:0000514!1.68e-07!42;CL:0000144!1.79e-07!625;CL:0000183!2.98e-07!59;CL:0002371!8.56e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.13e-22!180;CL:0000222!2.52e-15!119;CL:0000057!2.77e-13!75;CL:0000220!6.68e-13!246;CL:0002321!8.80e-13!248;CL:0000680!1.20e-08!57;CL:0000056!1.20e-08!57;CL:0000355!1.20e-08!57;CL:0000136!1.79e-08!15;CL:0000213!2.29e-08!57;CL:0000215!2.29e-08!57;CL:0000187!5.24e-08!54;CL:0000192!1.68e-07!42;CL:0000514!1.68e-07!42;CL:0000144!1.79e-07!625;CL:0000183!2.98e-07!59;CL:0002371!8.56e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.15e-09;12!CL:0000136;4.59e-09;13 | |ontology_enrichment_celltype_v019=CL:0002334;1.15e-09;12!CL:0000136;4.59e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.32e-11,121;CL:0000057,2.72e-11,76;CL:0000136,1.55e-10,15;CL:0002334,6.50e-10,12;CL:0000680,4.40e-07,58;CL:0000056,4.40e-07,58;CL:0000355,4.40e-07,58;CL:0000192,4.91e-07,43;CL:0000514,4.91e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.17e-14!79;UBERON:0007798!5.17e-14!79;UBERON:0000055!2.15e-13!69;UBERON:0001981!5.91e-13!60;UBERON:0007500!5.91e-13!60;UBERON:0004537!5.91e-13!60;UBERON:0006965!5.91e-13!60;UBERON:0004872!5.57e-12!84;UBERON:0003102!2.32e-11!95;UBERON:0001637!5.76e-11!42;UBERON:0003509!5.76e-11!42;UBERON:0004572!5.76e-11!42;UBERON:0000486!6.73e-11!82;UBERON:0000490!1.03e-10!138;UBERON:0000914!1.77e-10!83;UBERON:0002329!1.77e-10!83;UBERON:0003077!1.77e-10!83;UBERON:0003059!1.77e-10!83;UBERON:0007282!1.77e-10!83;UBERON:0009618!1.77e-10!83;UBERON:0007285!1.77e-10!83;UBERON:0004290!2.36e-09!70;UBERON:0002100!3.88e-09!216;UBERON:0005256!6.48e-09!143;UBERON:0000468!6.77e-09!659;UBERON:0002385!9.43e-09!63;UBERON:0001015!9.43e-09!63;UBERON:0000383!9.43e-09!63;UBERON:0001134!2.32e-08!61;UBERON:0002036!2.32e-08!61;UBERON:0003082!2.32e-08!61;UBERON:0004573!3.06e-08!33;UBERON:0004571!3.06e-08!33;UBERON:0003914!6.78e-08!118;UBERON:0001009!7.51e-08!113;UBERON:0004535!1.10e-07!110;UBERON:0002199!1.23e-07!45;UBERON:0002416!1.23e-07!45;UBERON:0000475!1.63e-07!365;UBERON:0006914!5.84e-07!25;UBERON:0000467!8.44e-07!625 | |ontology_enrichment_uberon=UBERON:0002049!5.17e-14!79;UBERON:0007798!5.17e-14!79;UBERON:0000055!2.15e-13!69;UBERON:0001981!5.91e-13!60;UBERON:0007500!5.91e-13!60;UBERON:0004537!5.91e-13!60;UBERON:0006965!5.91e-13!60;UBERON:0004872!5.57e-12!84;UBERON:0003102!2.32e-11!95;UBERON:0001637!5.76e-11!42;UBERON:0003509!5.76e-11!42;UBERON:0004572!5.76e-11!42;UBERON:0000486!6.73e-11!82;UBERON:0000490!1.03e-10!138;UBERON:0000914!1.77e-10!83;UBERON:0002329!1.77e-10!83;UBERON:0003077!1.77e-10!83;UBERON:0003059!1.77e-10!83;UBERON:0007282!1.77e-10!83;UBERON:0009618!1.77e-10!83;UBERON:0007285!1.77e-10!83;UBERON:0004290!2.36e-09!70;UBERON:0002100!3.88e-09!216;UBERON:0005256!6.48e-09!143;UBERON:0000468!6.77e-09!659;UBERON:0002385!9.43e-09!63;UBERON:0001015!9.43e-09!63;UBERON:0000383!9.43e-09!63;UBERON:0001134!2.32e-08!61;UBERON:0002036!2.32e-08!61;UBERON:0003082!2.32e-08!61;UBERON:0004573!3.06e-08!33;UBERON:0004571!3.06e-08!33;UBERON:0003914!6.78e-08!118;UBERON:0001009!7.51e-08!113;UBERON:0004535!1.10e-07!110;UBERON:0002199!1.23e-07!45;UBERON:0002416!1.23e-07!45;UBERON:0000475!1.63e-07!365;UBERON:0006914!5.84e-07!25;UBERON:0000467!8.44e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.77e-08;42!UBERON:0003509;3.77e-08;42!UBERON:0004572;3.77e-08;42!UBERON:0007500;1.67e-07;56!UBERON:0001981;1.67e-07;56!UBERON:0004537;1.67e-07;56!UBERON:0003688;3.37e-07;6!UBERON:0002358;3.37e-07;6!UBERON:0003684;3.37e-07;6!UBERON:0001178;3.37e-07;6!UBERON:0000055;7.81e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001637;3.77e-08;42!UBERON:0003509;3.77e-08;42!UBERON:0004572;3.77e-08;42!UBERON:0007500;1.67e-07;56!UBERON:0001981;1.67e-07;56!UBERON:0004537;1.67e-07;56!UBERON:0003688;3.37e-07;6!UBERON:0002358;3.37e-07;6!UBERON:0003684;3.37e-07;6!UBERON:0001178;3.37e-07;6!UBERON:0000055;7.81e-07;65 | ||
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|short_description=p7@PTRF | |short_description=p7@PTRF | ||
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Latest revision as of 14:40, 24 September 2015
Short description: | p7@PTRF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTRF_5end |
Coexpression cluster: | NA |
Association with transcript: | 308bp_to_BC004295_5end |
EntrezGene: | PTRF |
HGNC: | 9688 |
UniProt: | Q6NZI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.32e-11 | 121 |
fibroblast | 2.72e-11 | 76 |
fat cell | 1.55e-10 | 15 |
preadipocyte | 6.50e-10 | 12 |
muscle precursor cell | 4.40e-07 | 58 |
myoblast | 4.40e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-07 | 58 |
smooth muscle cell | 4.91e-07 | 43 |
smooth muscle myoblast | 4.91e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
vessel | 8.99e-13 | 68 |
epithelial tube open at both ends | 9.51e-13 | 59 |
blood vessel | 9.51e-13 | 59 |
blood vasculature | 9.51e-13 | 59 |
vascular cord | 9.51e-13 | 59 |
artery | 4.06e-11 | 42 |
arterial blood vessel | 4.06e-11 | 42 |
arterial system | 4.06e-11 | 42 |
vasculature | 5.22e-11 | 78 |
vascular system | 5.22e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 1.13e-09 | 83 |
surface structure | 6.80e-08 | 99 |
systemic artery | 8.48e-08 | 33 |
systemic arterial system | 8.48e-08 | 33 |
integument | 1.22e-07 | 46 |
integumental system | 1.22e-07 | 46 |
unilaminar epithelium | 5.32e-07 | 148 |
omentum | 5.74e-07 | 6 |
peritoneum | 5.74e-07 | 6 |
abdominal cavity | 5.74e-07 | 6 |
visceral peritoneum | 5.74e-07 | 6 |
dense mesenchyme tissue | 6.09e-07 | 73 |
muscle tissue | 7.01e-07 | 64 |
musculature | 7.01e-07 | 64 |
musculature of body | 7.01e-07 | 64 |