FFCP PHASE1:Hg19::chr12:70636861..70636884,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:70636861..70636884,+ to FFCP PHASE1:Hg19::chr12:70636861..70636884,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4848 | |EntrezGene=4848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7878 | |HGNC=7878 | ||
|TSSclassifier=strong | |||
|UniProt=B2RDX7,Q9NZN8 | |UniProt=B2RDX7,Q9NZN8 | ||
|association_with_transcript=51bp_to_ENST00000418359,NM_001199302,uc009zro.2_5end | |||
|cluster_id=chr12:70636861..70636884,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_5_at_CNOT2_5end | |||
|id=chr12:70636861..70636884,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.84e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.00e-20;8!CL:0000081;6.26e-19;11!CL:0000623;2.51e-11;3!CL:0000767;3.19e-11;3!CL:0000771;4.76e-08;2!CL:0001014;1.08e-07;2!CL:0001016;1.08e-07;2!CL:0000791;1.17e-07;18!CL:0000789;1.17e-07;18!CL:0002419;1.17e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,9.01e-21,8;CL:0000081,6.54e-19,11;CL:0000738,5.71e-12,136;CL:0000623,2.84e-11,3;CL:0000825,2.84e-11,3;CL:0000767,3.37e-11,3;CL:0000037,3.44e-10,168;CL:0000988,3.75e-10,177;CL:0002032,4.04e-09,161;CL:0000837,4.04e-09,161;CL:0000771,4.02e-08,2;CL:0001014,8.81e-08,2;CL:0001016,8.81e-08,2;CL:0000791,1.20e-07,18;CL:0000789,1.20e-07,18;CL:0002420,1.20e-07,18;CL:0002419,1.20e-07,18;CL:0000790,1.20e-07,18;CL:0000034,2.27e-07,441;CL:0000134,4.87e-07,354;CL:0000048,9.07e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.30e-08,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,3.93364276848904,5.37361157336098,2.01260960310899,0,0,0.369754010166788,0.232401601740905,0.426507697462265,1.17440175733939,0,2.4065333696417,0.868043482863407,0,0,0,0.290796477559129,0,0.727752183563449,0.464858073811369,0,0.619412741790207,0.28769239232215,0.256160706529101,0.709446689665756,0.689491361473237,1.29096936716765,0,0.376484679085209,0,0.674170453335254,0.612167784741805,0.641858054152187,1.91801137739712,0,0.398927315243264,0.426224750532694,0.290209238628584,0,1.24564449799115,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0.632924774881769,0,0.212604299965044,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,2.27685187643779,7.04684627245127,0.764546456250458,1.32171328579026,6.1655941927969,0.263384084775077,0.196709770113833,1.17903228824749,1.64481199199607,0,0.32592226663359,0,0,0,1.17842362989935,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,1.20964045934839,2.13952156626806,1.59306844271079,2.43806866313962,0,1.15076305659177,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,1.43094374583205,0.571994910780128,0.371457501329565,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.916008719652036,3.9534125230819,3.87780264148325,0,0,0.633152558322899,0.529636723252875,0,0,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0.576175924479999,0.234321431833797,0,1.1409436430889,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0.600952235626387,0.680593098960126,0.89694817844431,0.640672166455702,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0.169560592310488,0.386521706326594,0.545492241181669,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,6.89728533054321,0,0.829312462163088,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,4.13764596424047,3.01878604803324,3.7219480521127,0,2.60279707715243,0.773288812777695,0,0.637938751653163,2.24702107184155,0,4.55857064779639,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.647142602455851,2.98837161849644,0.303127571446259,0,0,0.248107807818777,0,0,0.512556597022804,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0,0,0.107420244868274,0,0.170453254832202,0.534192213880424,0,0.192190067365106,0.510450849978337,0.2023155617111,0.464845549297286,0.94443704049192,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0.211673582723883,0.324621940274555,0.280797178113459,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,0.23874448473769,0.296964680832639,0,0.994147647766298,0,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0.503865495708552,0.20453736500431,0,0.622079175323615,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,1.43753037910592,0.295547618953547,0.438770794307945,0,0,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.366390373607449,1.06606955203727,0,0.31396051279005,0.166211681900156,0,0,0.335643173951685,0,0,0.210998064528027,0.163232808159148,0,0,0,0.265372693510018,0,1.18608451472249,0.247127877893006,0.313265848516366,0,0,0.234264445725339,0.364909578431332,0.19566461893209,3.3989253134773,0,0,0.30607276163049,0.063186579628488,1.803881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| ||
|short_description=p5@CNOT2 | |||
}} | }} |
Latest revision as of 15:00, 24 September 2015
Short description: | p5@CNOT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CNOT2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 51bp_to_ENST00000418359, NM_001199302, uc009zro.2_5end |
EntrezGene: | CNOT2 |
HGNC: | 7878 |
UniProt: | B2RDX7Q9NZN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 9.01e-21 | 8 |
blood cell | 6.54e-19 | 11 |
leukocyte | 5.71e-12 | 136 |
natural killer cell | 2.84e-11 | 3 |
pro-NK cell | 2.84e-11 | 3 |
basophil | 3.37e-11 | 3 |
hematopoietic stem cell | 3.44e-10 | 168 |
hematopoietic cell | 3.75e-10 | 177 |
hematopoietic oligopotent progenitor cell | 4.04e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.04e-09 | 161 |
eosinophil | 4.02e-08 | 2 |
CD1a-positive Langerhans cell | 8.81e-08 | 2 |
immature CD1a-positive Langerhans cell | 8.81e-08 | 2 |
mature alpha-beta T cell | 1.20e-07 | 18 |
alpha-beta T cell | 1.20e-07 | 18 |
immature T cell | 1.20e-07 | 18 |
mature T cell | 1.20e-07 | 18 |
immature alpha-beta T cell | 1.20e-07 | 18 |
stem cell | 2.27e-07 | 441 |
mesenchymal cell | 4.87e-07 | 354 |
multi fate stem cell | 9.07e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.30e-08 | 371 |