FFCP PHASE1:Hg19::chr7:100609502..100609528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=162bp_to_ENST00000480291_5end | |association_with_transcript=162bp_to_ENST00000480291_5end | ||
|cluster_id=chr7:100609502..100609528,+ | |||
|coexpression_cluster_id=C1459 | |||
|description=CAGE_peak_12_at_MUC3A_5end,CAGE_peak_12_at_MUC3B_5end | |description=CAGE_peak_12_at_MUC3A_5end,CAGE_peak_12_at_MUC3B_5end | ||
|id=chr7:100609502..100609528,+ | |id=chr7:100609502..100609528,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.62e-15!5;CL:0000039!9.25e-15!7;CL:0000586!9.25e-15!7 | |ontology_enrichment_celltype=CL:0002322!1.62e-15!5;CL:0000039!9.25e-15!7;CL:0000586!9.25e-15!7 | ||
|ontology_enrichment_celltype_v019=CL:0002537;4.16e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.16e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.42e-15;3!UBERON:0003353;1.42e-15;3!UBERON:0001045;1.86e-12;1 | |||
|ontology_enrichment_disease=DOID:305!6.87e-08!106;DOID:0050687!2.76e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.86e-12;1!DOID:10165;1.86e-12;1!DOID:1798;1.86e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.96e-12,1;DOID:10165,1.96e-12,1;DOID:1798,1.96e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.17e-14!35;UBERON:0000160!5.22e-14!27;UBERON:0000059!1.02e-13!11;UBERON:0001737!6.79e-11!9;UBERON:0004907!1.74e-10!5;UBERON:0001155!5.73e-09!9;UBERON:0001052!1.05e-07!4;UBERON:0001046!2.25e-07!19;UBERON:0004921!9.23e-07!129;UBERON:0004185!9.23e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.86e-30;22!UBERON:0000160;9.18e-30;17!UBERON:0000059;1.72e-25;11!UBERON:0001155;3.37e-20;9!UBERON:0004921;8.55e-19;33!UBERON:0001154;1.86e-12;1!UBERON:0001153;1.86e-12;1!UBERON:0009854;1.86e-12;1!UBERON:0005631;8.78e-11;10!UBERON:0000158;8.78e-11;10!UBERON:0004907;5.69e-10;5!UBERON:0002108;8.49e-10;4!UBERON:0002367;1.36e-09;11!UBERON:0010147;1.36e-09;11!UBERON:0003937;7.77e-09;12!UBERON:0005399;7.77e-09;12!UBERON:0001555;1.35e-07;54!UBERON:0000305;1.84e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-29,17;UBERON:0005409,1.86e-26,25;UBERON:0000059,1.67e-25,11;UBERON:0001155,3.20e-20,9;UBERON:0001046,1.46e-14,19;UBERON:0001154,2.46e-12,1;UBERON:0001153,2.46e-12,1;UBERON:0001045,2.46e-12,1;UBERON:0004907,6.51e-10,5;UBERON:0004921,9.09e-10,118;UBERON:0002108,9.70e-10,4;UBERON:0002367,1.19e-09,11;UBERON:0010147,1.19e-09,11;UBERON:0009846,1.19e-09,11;UBERON:0003353,1.19e-09,11;UBERON:0004902,1.19e-09,11;UBERON:0003820,1.19e-09,11;UBERON:0009847,1.19e-09,11;UBERON:0003937,6.88e-09,12;UBERON:0005399,6.88e-09,12;UBERON:0004119,3.28e-08,160;UBERON:0000925,3.28e-08,160;UBERON:0006595,3.28e-08,160;UBERON:0005631,7.85e-08,14;UBERON:0000158,7.85e-08,14;UBERON:0000162,1.09e-07,14;UBERON:0001353,1.09e-07,14;UBERON:0000163,1.09e-07,14;UBERON:0006866,1.09e-07,14;UBERON:0000164,1.09e-07,14;UBERON:0000931,1.09e-07,14;UBERON:0001007,1.14e-07,145;UBERON:0001555,1.14e-07,145;UBERON:0007026,1.14e-07,145;UBERON:0000305,1.84e-07,7;UBERON:0004122,3.29e-07,15 | |||
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| ||
|short_description=p12@MUC3A,p12@MUC3B | |short_description=p12@MUC3A,p12@MUC3B | ||
}} | }} |
Latest revision as of 15:15, 24 September 2015
Short description: | p12@MUC3A, p12@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MUC3A_5end, CAGE_peak_12_at_MUC3B_5end |
Coexpression cluster: | C1459_rectum_colon_amniotic_Intestinal_small_chorionic_pancreatic |
Association with transcript: | 162bp_to_ENST00000480291_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.16e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.02e-29 | 17 |
gastrointestinal system | 1.86e-26 | 25 |
large intestine | 1.67e-25 | 11 |
colon | 3.20e-20 | 9 |
hindgut | 1.46e-14 | 19 |
vermiform appendix | 2.46e-12 | 1 |
caecum | 2.46e-12 | 1 |
midgut | 2.46e-12 | 1 |
lower digestive tract | 6.51e-10 | 5 |
subdivision of digestive tract | 9.09e-10 | 118 |
small intestine | 9.70e-10 | 4 |
prostate gland | 1.19e-09 | 11 |
male accessory sex gland | 1.19e-09 | 11 |
embryonic cloacal epithelium | 1.19e-09 | 11 |
epithelium of hindgut | 1.19e-09 | 11 |
urogenital sinus epithelium | 1.19e-09 | 11 |
prostate bud | 1.19e-09 | 11 |
prostate field | 1.19e-09 | 11 |
sex gland | 6.88e-09 | 12 |
male reproductive gland | 6.88e-09 | 12 |
endoderm-derived structure | 3.28e-08 | 160 |
endoderm | 3.28e-08 | 160 |
presumptive endoderm | 3.28e-08 | 160 |
extraembryonic membrane | 7.85e-08 | 14 |
membranous layer | 7.85e-08 | 14 |
cloaca | 1.09e-07 | 14 |
anal region | 1.09e-07 | 14 |
embryonic cloaca | 1.09e-07 | 14 |
terminal part of digestive tract | 1.09e-07 | 14 |
primitive urogenital sinus | 1.09e-07 | 14 |
proctodeum | 1.09e-07 | 14 |
digestive system | 1.14e-07 | 145 |
digestive tract | 1.14e-07 | 145 |
primitive gut | 1.14e-07 | 145 |
amnion | 1.84e-07 | 7 |
genitourinary system | 3.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.96e-12 | 1 |
endocrine pancreas cancer | 1.96e-12 | 1 |
pancreatic endocrine carcinoma | 1.96e-12 | 1 |