FFCP PHASE1:Hg19::chr7:100609627..100609654,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:100609627..100609654,+
|short_description=p3@MUC3A,p3@MUC3B
|description=CAGE_peak_3_at_MUC3A_5end,CAGE_peak_3_at_MUC3B_5end
|association_with_transcript=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=287bp_to_ENST00000480291_5end | |||
|cluster_id=chr7:100609627..100609654,+ | |||
|coexpression_cluster_id=C1459 | |||
|description=CAGE_peak_3_at_MUC3A_5end,CAGE_peak_3_at_MUC3B_5end | |||
|id=chr7:100609627..100609654,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.42e-10!254;CL:0000039!1.27e-09!7;CL:0000586!1.27e-09!7;CL:0002322!2.26e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.44e-15;7!CL:0000586;3.44e-15;7!CL:0002322;9.20e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.85e-15,7;CL:0000586,2.85e-15,7;CL:0002322,8.83e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.54e-10;3!UBERON:0003353;9.54e-10;3!UBERON:0009117;3.64e-07;10!UBERON:0005564;3.64e-07;10 | |||
|ontology_enrichment_disease=DOID:305!6.15e-21!106;DOID:0050687!6.95e-20!143;DOID:14566!8.42e-13!239;DOID:162!1.51e-12!235;DOID:299!1.22e-11!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.98e-12,106;DOID:0050687,6.73e-12,143;DOID:162,3.53e-07,235;DOID:14566,7.26e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.86e-11!35;UBERON:0000160!1.60e-10!27;UBERON:0004921!6.94e-10!129;UBERON:0004185!6.94e-10!129;UBERON:0004119!1.10e-08!169;UBERON:0000925!1.10e-08!169;UBERON:0006595!1.10e-08!169;UBERON:0001007!1.26e-08!155;UBERON:0001555!1.26e-08!155;UBERON:0007026!1.26e-08!155;UBERON:0001737!1.06e-07!9;UBERON:0000077!6.92e-07!130;UBERON:0001046!9.09e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.31e-20;22!UBERON:0000160;1.90e-19;17!UBERON:0000059;9.98e-14;11!UBERON:0004921;4.90e-13;33!UBERON:0004907;1.66e-10;5!UBERON:0003101;3.24e-09;22!UBERON:0000079;3.24e-09;22!UBERON:0001155;6.47e-09;9!UBERON:0000922;8.38e-09;49!UBERON:0001052;1.08e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-19,17;UBERON:0005409,6.92e-18,25;UBERON:0000059,9.63e-14,11;UBERON:0001046,1.87e-11,19;UBERON:0004907,1.58e-10,5;UBERON:0003101,3.67e-09,22;UBERON:0000079,3.67e-09,22;UBERON:0001155,6.02e-09,9;UBERON:0004921,1.66e-08,118;UBERON:0001007,4.40e-08,145;UBERON:0001555,4.40e-08,145;UBERON:0007026,4.40e-08,145;UBERON:0001052,1.05e-07,4;UBERON:0004119,9.29e-07,160;UBERON:0000925,9.29e-07,160;UBERON:0006595,9.29e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04934265323988,1.85541675650079,3.48581828608555,2.07322110030741,4.28945446488568,1.82488679537915,0,0,0,0,0,0.473227200159376,1.51726221070292,0.241011029883482,1.10293972732394,0.871517776369625,1.18635309555548,1.21348177344148,0,0.38474715694639,0,0,0,0,0,0,0,0,5.78045661152634,0,0.329250856225877,0,0.804231779293047,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40555082835598,0.601519410909855,1.01289087829486,0,0,0,0.451199612907412,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,12.3512756669425,0,0.36408156524854,0,0.284136146806413,19.8157922332283,0.296964680832639,19.0439635301524,0,0,0,0,0,0.19924798825107,12.9853440299639,0,0,0.123084805461069,0,0,4.65455054156584,0,0,0,0,0,0,1.99613798001194,1.04171104434093,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,1.74301541630384,0.697118721393016,0.0769502585037971,0,13.3727064545075,2.78248697670294,5.10642648033438,5.10401855571071,0.0915975934018623,0,0,0,0,0.902382642468723,1.17637520590644,1.84603745673427,0,0,0,0.163232808159148,2.82706142867882,0,29.8578579323551,11.7648560789441,34.217688116283,0,0.123563938946503,0.208843899010911,0,0,0.234264445725339,0,9.00057247087613,0,0,2.41981432097328,2.14250933141343,0,0,0,1.32930774541437,0.661983911750998,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,2.91245218081951,0,0,0,0,1.75996244461323,0.0801588202515337,2.56143593687223,2.59752492456769,9.6540579493251,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,4.66184130548556,3.02586760513914,2.07720169014593,0,0,0,0.335434687599266,0.394028536495991,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0.13223260174269,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.428883182749851,0,0,0,0,0,2.16161013012681,0.219284049578707,0,0.578742114812744,0,0.512483037175893,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,1.47221577751538,0.471878893390961,0,0.924205329202706,0,0.690359926060101,0,0,0,0,7.07148075099841,0,0.443568258651136,0.135075169236789,0,0,0.0634158101939068,1.09394961803644,0,0,0,2.55524855279191,0,0,0,0.227662191351298,0.79832133146375,0.115233987555779,0,0,0,1.18193840883968,8.67604934758139,4.55259938532981,0,4.20408244970683,41.0921424229273,0.215927591218621,0,0,0,0.464965701472501,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0,0,7.04689220326092,0.687051635306701,14.7520689228546,0,0,0,0,0.701818390386317,0,0.118920090777569,0,0,0,10.2641630283566,4.37119121007915,5.64380755633827,0.245148321753905,4.00650130072764,0,0,0,0,0,0,0.0999411559249289,4.6424024037471,0.352894871715692,0.641930933513346,0,0.458729283404541,0,0,0,0,3.7031878836078,0,0,0,0.378499274505237,0.218531143927391,0,1.42784361638774,3.74104367371785,0.643264296743914,3.76061308938563,0.303114792872958,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0.665756774185513,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04934265323988,1.85541675650079,3.48581828608555,2.07322110030741,4.28945446488568,1.82488679537915,0,0,0,0,0,0.473227200159376,1.51726221070292,0.241011029883482,1.10293972732394,0.871517776369625,1.18635309555548,1.21348177344148,0,0.38474715694639,0,0,0,0,0,0,0,0,5.78045661152634,0,0.329250856225877,0,0.804231779293047,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40555082835598,0.601519410909855,1.01289087829486,0,0,0,0.451199612907412,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,12.3512756669425,0,0.36408156524854,0,0.284136146806413,19.8157922332283,0.296964680832639,19.0439635301524,0,0,0,0,0,0.19924798825107,12.9853440299639,0,0,0.123084805461069,0,0,4.65455054156584,0,0,0,0,0,0,1.99613798001194,1.04171104434093,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,1.74301541630384,0.697118721393016,0.0769502585037971,0,13.3727064545075,2.78248697670294,5.10642648033438,5.10401855571071,0.0915975934018623,0,0,0,0,0.902382642468723,1.17637520590644,1.84603745673427,0,0,0,0.163232808159148,2.82706142867882,0,29.8578579323551,11.7648560789441,34.217688116283,0,0.123563938946503,0.208843899010911,0,0,0.234264445725339,0,9.00057247087613,0,0,2.41981432097328,2.14250933141343,0,0,0,1.32930774541437,0.661983911750998,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,2.91245218081951,0,0,0,0,1.75996244461323,0.0801588202515337,2.56143593687223,2.59752492456769,9.6540579493251,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,4.66184130548556,3.02586760513914,2.07720169014593,0,0,0,0.335434687599266,0.394028536495991,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0.13223260174269,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.428883182749851,0,0,0,0,0,2.16161013012681,0.219284049578707,0,0.578742114812744,0,0.512483037175893,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,1.47221577751538,0.471878893390961,0,0.924205329202706,0,0.690359926060101,0,0,0,0,7.07148075099841,0,0.443568258651136,0.135075169236789,0,0,0.0634158101939068,1.09394961803644,0,0,0,2.55524855279191,0,0,0,0.227662191351298,0.79832133146375,0.115233987555779,0,0,0,1.18193840883968,8.67604934758139,4.55259938532981,0,4.20408244970683,41.0921424229273,0.215927591218621,0,0,0,0.464965701472501,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0,0,7.04689220326092,0.687051635306701,14.7520689228546,0,0,0,0,0.701818390386317,0,0.118920090777569,0,0,0,10.2641630283566,4.37119121007915,5.64380755633827,0.245148321753905,4.00650130072764,0,0,0,0,0,0,0.0999411559249289,4.6424024037471,0.352894871715692,0.641930933513346,0,0.458729283404541,0,0,0,0,3.7031878836078,0,0,0,0.378499274505237,0.218531143927391,0,1.42784361638774,3.74104367371785,0.643264296743914,3.76061308938563,0.303114792872958,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p3@MUC3A,p3@MUC3B | |||
}} | }} |
Latest revision as of 15:17, 24 September 2015
Short description: | p3@MUC3A, p3@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MUC3A_5end, CAGE_peak_3_at_MUC3B_5end |
Coexpression cluster: | C1459_rectum_colon_amniotic_Intestinal_small_chorionic_pancreatic |
Association with transcript: | 287bp_to_ENST00000480291_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.85e-15 | 7 |
germ cell | 2.85e-15 | 7 |
embryonic stem cell | 8.83e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-19 | 17 |
gastrointestinal system | 6.92e-18 | 25 |
large intestine | 9.63e-14 | 11 |
hindgut | 1.87e-11 | 19 |
lower digestive tract | 1.58e-10 | 5 |
male organism | 3.67e-09 | 22 |
male reproductive system | 3.67e-09 | 22 |
colon | 6.02e-09 | 9 |
subdivision of digestive tract | 1.66e-08 | 118 |
digestive system | 4.40e-08 | 145 |
digestive tract | 4.40e-08 | 145 |
primitive gut | 4.40e-08 | 145 |
rectum | 1.05e-07 | 4 |
endoderm-derived structure | 9.29e-07 | 160 |
endoderm | 9.29e-07 | 160 |
presumptive endoderm | 9.29e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.98e-12 | 106 |
cell type cancer | 6.73e-12 | 143 |
cancer | 3.53e-07 | 235 |
disease of cellular proliferation | 7.26e-07 | 239 |