FFCP PHASE1:Hg19::chr17:40833858..40833861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2826 | |EntrezGene=2826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4474 | |HGNC=4474 | ||
|TSSclassifier=strong | |||
|UniProt=P46092 | |UniProt=P46092 | ||
|association_with_transcript=0bp_to_ENST00000332438_5end | |association_with_transcript=0bp_to_ENST00000332438_5end | ||
|cluster_id=chr17:40833858..40833861,- | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_1_at_CCR10_5end | |description=CAGE_peak_1_at_CCR10_5end | ||
|id=chr17:40833858..40833861,- | |id=chr17:40833858..40833861,- | ||
|ontology_enrichment_celltype=CL:0000542!7.51e-29!53;CL:0000051!7.51e-29!53;CL:0000838!1.11e-27!52;CL:0000945!2.10e-17!24;CL:0000826!2.10e-17!24;CL:0000791!6.63e-16!18;CL:0000789!6.63e-16!18;CL:0002420!6.63e-16!18;CL:0002419!6.63e-16!18;CL:0000790!6.63e-16!18;CL:0000084!6.99e-14!25;CL:0000827!6.99e-14!25;CL:0002139!1.24e-11!24;CL:0000236!5.59e-11!14;CL:0000625!2.59e-09!11;CL:0002087!4.05e-09!119;CL:0000115!4.37e-09!35;CL:0000738!1.64e-07!140;CL:0000624!2.55e-07!6;CL:0005020!4.08e-07!6;CL:0002138!4.08e-07!6;CL:0005022!4.08e-07!6;CL:0000071!7.45e-07!18;CL:0002546!7.45e-07!18 | |ontology_enrichment_celltype=CL:0000542!7.51e-29!53;CL:0000051!7.51e-29!53;CL:0000838!1.11e-27!52;CL:0000945!2.10e-17!24;CL:0000826!2.10e-17!24;CL:0000791!6.63e-16!18;CL:0000789!6.63e-16!18;CL:0002420!6.63e-16!18;CL:0002419!6.63e-16!18;CL:0000790!6.63e-16!18;CL:0000084!6.99e-14!25;CL:0000827!6.99e-14!25;CL:0002139!1.24e-11!24;CL:0000236!5.59e-11!14;CL:0000625!2.59e-09!11;CL:0002087!4.05e-09!119;CL:0000115!4.37e-09!35;CL:0000738!1.64e-07!140;CL:0000624!2.55e-07!6;CL:0005020!4.08e-07!6;CL:0002138!4.08e-07!6;CL:0005022!4.08e-07!6;CL:0000071!7.45e-07!18;CL:0002546!7.45e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.10e-27;24!CL:0000542;7.49e-18;53!CL:0000236;1.23e-14;13!CL:0002144;1.73e-13;3!CL:0000791;6.84e-11;18!CL:0000789;6.84e-11;18!CL:0002419;6.84e-11;18!CL:0000084;1.00e-09;25!CL:0000625;1.41e-09;11!CL:0002139;1.08e-07;24!CL:0002138;7.07e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.34e-31,52;CL:0000542,1.62e-30,53;CL:0000051,1.62e-30,53;CL:0000945,1.84e-27,24;CL:0000826,1.84e-27,24;CL:0000236,4.37e-18,14;CL:0002144,2.20e-13,3;CL:0002087,3.24e-11,115;CL:0000791,7.46e-11,18;CL:0000789,7.46e-11,18;CL:0002420,7.46e-11,18;CL:0002419,7.46e-11,18;CL:0000790,7.46e-11,18;CL:0002031,1.49e-10,120;CL:0000084,1.19e-09,25;CL:0000827,1.19e-09,25;CL:0000625,1.46e-09,11;CL:0000738,9.09e-09,136;CL:0002139,1.17e-07,24;CL:0002032,1.56e-07,161;CL:0000837,1.56e-07,161;CL:0000037,5.04e-07,168;CL:0005020,6.59e-07,6;CL:0002138,6.59e-07,6;CL:0005022,6.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;7.49e-18;53!CL:0000790;6.84e-11;18!CL:0005022;7.07e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.88e-08!7;UBERON:0002465!8.34e-08!10;UBERON:0000178!1.57e-07!15;UBERON:0000179!1.57e-07!15;UBERON:0000463!1.57e-07!15;UBERON:0001986!7.45e-07!18;UBERON:0004638!7.45e-07!18;UBERON:0004852!7.45e-07!18 | |ontology_enrichment_uberon=UBERON:0004177!6.88e-08!7;UBERON:0002465!8.34e-08!10;UBERON:0000178!1.57e-07!15;UBERON:0000179!1.57e-07!15;UBERON:0000463!1.57e-07!15;UBERON:0001986!7.45e-07!18;UBERON:0004638!7.45e-07!18;UBERON:0004852!7.45e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.73e-13;3!UBERON:0001915;1.73e-13;3!UBERON:0001982;1.73e-13;3!UBERON:0002465;2.13e-10;10!UBERON:0001829;2.91e-09;2!UBERON:0002193;1.40e-07;42!UBERON:0002405;9.33e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.20e-13,3;UBERON:0001915,2.20e-13,3;UBERON:0001982,2.20e-13,3;UBERON:0002465,2.36e-10,10;UBERON:0001829,3.38e-09,2 | |||
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| ||
|short_description=p1@CCR10 | |short_description=p1@CCR10 | ||
}} | }} |
Latest revision as of 15:42, 24 September 2015
Short description: | p1@CCR10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCR10_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 0bp_to_ENST00000332438_5end |
EntrezGene: | CCR10 |
HGNC: | 4474 |
UniProt: | P46092 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.34e-31 | 52 |
lymphocyte | 1.62e-30 | 53 |
common lymphoid progenitor | 1.62e-30 | 53 |
lymphocyte of B lineage | 1.84e-27 | 24 |
pro-B cell | 1.84e-27 | 24 |
B cell | 4.37e-18 | 14 |
capillary endothelial cell | 2.20e-13 | 3 |
nongranular leukocyte | 3.24e-11 | 115 |
mature alpha-beta T cell | 7.46e-11 | 18 |
alpha-beta T cell | 7.46e-11 | 18 |
immature T cell | 7.46e-11 | 18 |
mature T cell | 7.46e-11 | 18 |
immature alpha-beta T cell | 7.46e-11 | 18 |
hematopoietic lineage restricted progenitor cell | 1.49e-10 | 120 |
T cell | 1.19e-09 | 25 |
pro-T cell | 1.19e-09 | 25 |
CD8-positive, alpha-beta T cell | 1.46e-09 | 11 |
leukocyte | 9.09e-09 | 136 |
endothelial cell of vascular tree | 1.17e-07 | 24 |
hematopoietic oligopotent progenitor cell | 1.56e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-07 | 161 |
hematopoietic stem cell | 5.04e-07 | 168 |
lymphangioblast | 6.59e-07 | 6 |
endothelial cell of lymphatic vessel | 6.59e-07 | 6 |
vascular lymphangioblast | 6.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.20e-13 | 3 |
endothelium of capillary | 2.20e-13 | 3 |
capillary | 2.20e-13 | 3 |
lymphoid system | 2.36e-10 | 10 |
major salivary gland | 3.38e-09 | 2 |