FFCP PHASE1:Hg19::chr12:71003881..71003904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5787 | |EntrezGene=5787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9665 | |HGNC=9665 | ||
|TSSclassifier=strong | |||
|UniProt=P23467,B7ZKS8,F5H3G6 | |UniProt=P23467,B7ZKS8,F5H3G6 | ||
|association_with_transcript=-257bp_to_ENST00000261266,NM_001206971,NM_001206972,NM_002837,uc001swb.3,uc010sto.1,uc010stp.1_5end | |association_with_transcript=-257bp_to_ENST00000261266,NM_001206971,NM_001206972,NM_002837,uc001swb.3,uc010sto.1,uc010stp.1_5end | ||
|cluster_id=chr12:71003881..71003904,- | |||
|description=CAGE_peak_5_at_PTPRB_5end | |description=CAGE_peak_5_at_PTPRB_5end | ||
|id=chr12:71003881..71003904,- | |id=chr12:71003881..71003904,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.65e-10;32!CL:0002592;1.77e-08;3!CL:0000064;1.64e-07;3!CL:0000067;1.64e-07;3!CL:0005012;1.64e-07;3!CL:0002304;1.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.01e-11,32;CL:0002592,9.53e-09,3;CL:0000192,7.36e-08,43;CL:0000514,7.36e-08,43;CL:0000064,1.25e-07,3;CL:0000067,1.25e-07,3;CL:0005012,1.25e-07,3;CL:0002304,1.25e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.51e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.73e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.87e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!1.21e-18!194;UBERON:0007023!1.03e-17!115;UBERON:0004111!1.06e-16!241;UBERON:0000477!2.07e-16!286;UBERON:0004872!3.48e-15!84;UBERON:0001981!1.70e-14!60;UBERON:0007500!1.70e-14!60;UBERON:0004537!1.70e-14!60;UBERON:0006965!1.70e-14!60;UBERON:0000055!1.69e-13!69;UBERON:0002049!4.35e-13!79;UBERON:0007798!4.35e-13!79;UBERON:0001637!1.03e-12!42;UBERON:0003509!1.03e-12!42;UBERON:0004572!1.03e-12!42;UBERON:0004573!1.21e-11!33;UBERON:0004571!1.21e-11!33;UBERON:0000483!1.96e-11!309;UBERON:0001009!3.22e-11!113;UBERON:0000119!3.51e-11!312;UBERON:0003075!7.00e-11!86;UBERON:0007284!7.00e-11!86;UBERON:0003914!2.28e-10!118;UBERON:0004535!4.86e-10!110;UBERON:0002346!1.30e-09!90;UBERON:0007100!2.62e-09!27;UBERON:0003080!6.85e-09!42;UBERON:0003056!6.94e-09!61;UBERON:0001049!1.44e-08!57;UBERON:0005068!1.44e-08!57;UBERON:0006241!1.44e-08!57;UBERON:0007135!1.44e-08!57;UBERON:0002780!2.37e-08!41;UBERON:0001890!2.37e-08!41;UBERON:0006240!2.37e-08!41;UBERON:0000467!3.44e-08!625;UBERON:0000947!4.17e-08!21;UBERON:0010191!4.17e-08!21;UBERON:0000480!4.52e-08!626;UBERON:0000468!4.57e-08!659;UBERON:0000481!8.06e-08!347;UBERON:0000955!1.02e-07!69;UBERON:0006238!1.02e-07!69;UBERON:0000948!1.13e-07!24;UBERON:0005498!1.13e-07!24;UBERON:0004140!1.13e-07!24;UBERON:0009881!1.13e-07!24;UBERON:0004141!1.13e-07!24;UBERON:0003084!1.13e-07!24;UBERON:0007005!1.13e-07!24;UBERON:0004139!1.13e-07!24;UBERON:0004291!1.13e-07!24;UBERON:0002616!2.60e-07!59;UBERON:0001048!2.97e-07!168;UBERON:0005743!5.45e-07!86;UBERON:0001893!8.92e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.48e-13;33!UBERON:0004571;2.48e-13;33!UBERON:0001637;9.64e-13;42!UBERON:0003509;9.64e-13;42!UBERON:0004572;9.64e-13;42!UBERON:0007100;1.68e-09;25!UBERON:0000488;1.82e-09;4!UBERON:0000948;3.35e-09;22!UBERON:0003498;1.77e-08;3!UBERON:0005985;1.77e-08;3!UBERON:0001621;1.77e-08;3!UBERON:0002118;5.31e-08;5!UBERON:0000947;9.60e-08;21!UBERON:0010191;9.60e-08;21!UBERON:0001778;1.64e-07;3!UBERON:0001775;1.64e-07;3!UBERON:0007500;4.29e-07;56!UBERON:0001981;4.29e-07;56!UBERON:0004537;4.29e-07;56!UBERON:0002049;6.16e-07;75!UBERON:0007798;6.16e-07;75!UBERON:0000055;8.16e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.66e-16,78;UBERON:0007798,1.66e-16,78;UBERON:0004872,2.39e-16,83;UBERON:0001637,5.19e-16,42;UBERON:0003509,5.19e-16,42;UBERON:0004572,5.19e-16,42;UBERON:0007500,1.76e-15,59;UBERON:0001981,1.76e-15,59;UBERON:0004537,1.76e-15,59;UBERON:0006965,1.76e-15,59;UBERON:0001009,2.86e-15,112;UBERON:0004573,3.39e-15,33;UBERON:0004571,3.39e-15,33;UBERON:0004535,8.98e-15,109;UBERON:0000055,6.10e-14,68;UBERON:0003498,7.64e-13,5;UBERON:0005985,7.64e-13,5;UBERON:0007100,3.86e-12,27;UBERON:0003914,4.00e-12,117;UBERON:0000948,6.61e-12,24;UBERON:0005498,6.61e-12,24;UBERON:0004140,6.61e-12,24;UBERON:0009881,6.61e-12,24;UBERON:0004141,6.61e-12,24;UBERON:0003084,6.61e-12,24;UBERON:0007005,6.61e-12,24;UBERON:0004139,6.61e-12,24;UBERON:0004291,6.61e-12,24;UBERON:0001048,6.85e-10,160;UBERON:0000488,7.72e-10,4;UBERON:0001621,9.53e-09,3;UBERON:0004797,1.35e-08,7;UBERON:0002118,3.87e-08,5;UBERON:0004145,4.10e-08,3;UBERON:0000947,6.92e-08,21;UBERON:0010191,6.92e-08,21;UBERON:0000025,7.48e-08,192;UBERON:0001778,1.25e-07,3;UBERON:0001775,1.25e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,3.36162573225888,0.602694528023977,1.46062018077475,1.95173119516203,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.255725123687061,0,0,0,0,0,1.51255707462509,1.55210578223795,1.14185221401064,1.11332214173056,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,1.13061588384802,0,0,0.626984899610432,0.775250277507987,0.35576626268671,1.33888245105868,0,0,0.24406205754817,0,0.81014194788176,0.535798369704479,0.44905874525234,0.900891843866578,0,0,0.732806975721629,0,0,0,0.496971951695318,0.506522046658319,2.1185468930115,1.72101972449288,1.06400514659507,0,1.06748995729705,0.98667019366864,0,0.808264032418128,1.14423332179421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1552114800404,0,0,0.211931901159562,0.300091096084402,0,0.772921620136887,0.37223371266318,0.843881661206331,0.389748020644795,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0.842923450390509,0.241011029883482,0.330881918197182,0,1.18635309555548,0.269662616320329,0.392442930250692,0.769494313892781,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,1.71567810298526,0,0,0,0,0,0,0,2.08674728955138,0.469634776943287,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58487181223807,1.24396869324463,0.432359860250884,1.2624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,1.38115775959256,1.68396056659844,0.384417447767103,1.02341449813341,0.804269605718038,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0,0,0.231046011313244,1.56869953835371,0,0.633309773357254,0,0.170093705276516,0.863663664408557,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0,0.976135183992909,0.515205058238611,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.94443704049192,0,3.38836938193698,1.59691809095107,0,1.11194531462352,1.86062352764589,0,0,0,0,0,1.59101623962968,0,0,0.274537029736055,0.117812402345686,1.61745985258653,6.34041284692033,2.94880919367287,0,0.974853958525138,0,0,0,1.13008116620243,0.551365343546124,1.32687795048244,0,0,0,0.405820753925408,0,0.845086807596724,0.143411352204052,0,1.07001315444375,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0.614481528616916,0.894704431569664,0,0,0.278406173895242,0,0,0,0,0.18714054040822,1.17206543417515,0,0,0,0,0,0,0,0.281338832821026,1.11308705022906,0,0,0.796991953004279,0,0.503865495708552,0.511343412510774,0,0.933118762985422,1.61763032065188,0,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,1.44999915086959,1.137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.658156191461918,0,0,0.692552326534174,0.227884111694002,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.794682894901893,0,3.10142335502381,0.141353071433941,0.216388639742091,0,0.530745387020035,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0.391329237864179,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,0.884612114798832,0.150323419414493,0,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0.957651272384428,0.34945333648406,2.92376255201748,0.0967563312890851,0.0730893170861856,0.328461828212837,0.775912131907355,0.529536760149002,0,0.822251547880505,0,0.949661939338181,0,0,1.49417096317547,0,2.16135625731159,0,0,0.432164393964449,0.248505071130865,0,0.135904206073614,0,0,0.577901179803038,0.600420288709789,0.273810757783986,0,2.14882720709979,0,1.39641200636127,0.687481272035051,2.15361907373044,0.998395002494955,0.858452096273142,1.33902874465124,1.07493555978762,1.08089965062721,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0.668245123238271,0,1.10327990218877,0.734364233889974,0.211200673038813,0.179287339332845,0.767660789277781,3.57347663186684,0,0,0,0,0,0,0.164185041498678,5.11164065356265,0.113312091520126,0.439656701034247,0,0.258565912723101,0,0.171086837884329,0,3.9511342650047,1.88645166119599,4.55662960881915,0,0,0,0,0,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0.244052529803926,0.250381861413,0,0.443716206147409,0.620964029413834,0.276697269872462,0.37494122388632,0.303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| ||
|short_description=p5@PTPRB | |short_description=p5@PTPRB | ||
}} | }} |
Latest revision as of 15:57, 24 September 2015
Short description: | p5@PTPRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPRB_5end |
Coexpression cluster: | NA |
Association with transcript: | -257bp_to_ENST00000261266, NM_001206971, NM_001206972, NM_002837, uc001swb.3, uc010sto.1, uc010stp.1_5end |
EntrezGene: | PTPRB |
HGNC: | 9665 |
UniProt: | P23467B7ZKS8F5H3G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.01e-11 | 32 |
smooth muscle cell of the coronary artery | 9.53e-09 | 3 |
smooth muscle cell | 7.36e-08 | 43 |
smooth muscle myoblast | 7.36e-08 | 43 |
ciliated cell | 1.25e-07 | 3 |
ciliated epithelial cell | 1.25e-07 | 3 |
multi-ciliated epithelial cell | 1.25e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.87e-10 | 14 |