FFCP PHASE1:Hg19::chr9:117444458..117444472,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505478 | |EntrezGene=100505478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-89bp_to_NM_001199233_5end | |association_with_transcript=-89bp_to_NM_001199233_5end | ||
|cluster_id=chr9:117444458..117444472,- | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_1_at_LOC100505478_5end | |description=CAGE_peak_1_at_LOC100505478_5end | ||
|id=chr9:117444458..117444472,- | |id=chr9:117444458..117444472,- | ||
|ontology_enrichment_celltype=CL:0000080!2.11e-07!6 | |ontology_enrichment_celltype=CL:0000080!2.11e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002127;4.72e-17;1!CL:0000911;4.72e-17;1!CL:0000814;4.72e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.72e-17,1;CL:0000914,4.72e-17,1;CL:0000911,4.72e-17,1;CL:0000814,4.72e-17,1;CL:0002042,4.72e-17,1;CL:0002039,4.72e-17,1;CL:0002040,4.72e-17,1;CL:0002041,4.72e-17,1;CL:0000893,3.43e-09,2;CL:0002489,3.43e-09,2;CL:0000809,3.43e-09,2;CL:0000808,3.43e-09,2;CL:0000894,3.43e-09,2;CL:0000806,3.43e-09,2;CL:0000807,3.43e-09,2;CL:0000805,3.43e-09,2;CL:0002425,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.28e-21;3!UBERON:0003353;2.28e-21;3!CL:0002425;3.43e-09;2 | |||
|ontology_enrichment_disease=DOID:0050687!5.45e-08!143;DOID:305!9.30e-07!106 | |ontology_enrichment_disease=DOID:0050687!5.45e-08!143;DOID:305!9.30e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4074;6.67e-09;2!DOID:4905;6.67e-09;2!DOID:3498;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,5.49e-09,2;DOID:4905,5.49e-09,2;DOID:3498,5.49e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.42e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.94e-07,10;UBERON:0000358,5.94e-07,10;UBERON:0000307,5.94e-07,10;UBERON:0000091,5.94e-07,10;UBERON:0000087,5.94e-07,10;UBERON:0007010,5.94e-07,10;UBERON:0007806,5.94e-07,10;UBERON:0008780,5.94e-07,10;UBERON:0005728,5.94e-07,10 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47187681102573,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0,0,0,1.15282187753108,0.780356085359269,1.97325485524411,0.829050053357545,0,0,0,0,2.15287751125376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0.61417158655884,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5360035353916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,1.48260564340311,0.617819694732514,1.04421949505455,0,0,0,0.364909578431332,0.391329237864179,1.69946265673865,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0,2.35746944122336,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0.397429223405979,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0.576361668616424,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0.33946505990805,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924205329202706,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,2.22462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0.955538938977433,0,0,0,0,0,0,0,0.935757853848423,0.198950775161368,0,0,0,1.66059127923341,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,4.58763333230399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@LOC100505478 | |short_description=p1@LOC100505478 | ||
}} | }} |
Latest revision as of 16:02, 24 September 2015
Short description: | p1@LOC100505478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100505478_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | -89bp_to_NM_001199233_5end |
EntrezGene: | LOC100505478 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.72e-17 | 1 |
immature NK T cell | 4.72e-17 | 1 |
effector T cell | 4.72e-17 | 1 |
mature NK T cell | 4.72e-17 | 1 |
immature NK T cell stage IV | 4.72e-17 | 1 |
immature NK T cell stage I | 4.72e-17 | 1 |
immature NK T cell stage II | 4.72e-17 | 1 |
immature NK T cell stage III | 4.72e-17 | 1 |
thymocyte | 3.43e-09 | 2 |
double negative thymocyte | 3.43e-09 | 2 |
double-positive, alpha-beta thymocyte | 3.43e-09 | 2 |
DN4 thymocyte | 3.43e-09 | 2 |
DN1 thymic pro-T cell | 3.43e-09 | 2 |
DN2 thymocyte | 3.43e-09 | 2 |
DN3 thymocyte | 3.43e-09 | 2 |
immature single positive thymocyte | 3.43e-09 | 2 |
early T lineage precursor | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.94e-07 | 10 |
blastocyst | 5.94e-07 | 10 |
blastula | 5.94e-07 | 10 |
bilaminar disc | 5.94e-07 | 10 |
inner cell mass | 5.94e-07 | 10 |
cleaving embryo | 5.94e-07 | 10 |
connecting stalk | 5.94e-07 | 10 |
inner cell mass derived epiblast | 5.94e-07 | 10 |
extraembryonic mesoderm | 5.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 5.49e-09 | 2 |
pancreatic carcinoma | 5.49e-09 | 2 |
pancreatic ductal adenocarcinoma | 5.49e-09 | 2 |