FFCP PHASE1:Hg19::chr12:72080145..72080169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55266 | |EntrezGene=55266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25605 | |HGNC=25605 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-106bp_to_ENST00000549735_5end | |association_with_transcript=-106bp_to_ENST00000549735_5end | ||
|cluster_id=chr12:72080145..72080169,+ | |||
|description=CAGE_peak_5_at_TMEM19_5end | |description=CAGE_peak_5_at_TMEM19_5end | ||
|id=chr12:72080145..72080169,+ | |id=chr12:72080145..72080169,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.00e-12!52;CL:0000542!2.89e-12!53;CL:0000051!2.89e-12!53;CL:0000791!2.65e-10!18;CL:0000789!2.65e-10!18;CL:0002420!2.65e-10!18;CL:0002419!2.65e-10!18;CL:0000790!2.65e-10!18;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000625!3.50e-08!11 | |ontology_enrichment_celltype=CL:0000838!1.00e-12!52;CL:0000542!2.89e-12!53;CL:0000051!2.89e-12!53;CL:0000791!2.65e-10!18;CL:0000789!2.65e-10!18;CL:0002420!2.65e-10!18;CL:0002419!2.65e-10!18;CL:0000790!2.65e-10!18;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000625!3.50e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.64e-20;18!CL:0000789;4.64e-20;18!CL:0002419;4.64e-20;18!CL:0000084;1.52e-16;25!CL:0000625;8.08e-16;11!CL:0000542;1.60e-12;53!CL:0000236;8.64e-11;13!CL:0000624;1.87e-07;6!CL:0000945;9.20e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.51e-22,52;CL:0000542,1.09e-21,53;CL:0000051,1.09e-21,53;CL:0000791,4.68e-20,18;CL:0000789,4.68e-20,18;CL:0002420,4.68e-20,18;CL:0002419,4.68e-20,18;CL:0000790,4.68e-20,18;CL:0000084,1.19e-16,25;CL:0000827,1.19e-16,25;CL:0000625,9.11e-16,11;CL:0000236,4.55e-12,14;CL:0000738,3.26e-11,136;CL:0002087,6.54e-10,115;CL:0002031,1.27e-09,120;CL:0000624,1.70e-07,6;CL:0000037,3.65e-07,168;CL:0000945,5.62e-07,24;CL:0000826,5.62e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;4.64e-20;18!CL:0000051;1.60e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.88e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.49e-08,114 | |||
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| ||
|short_description=p5@TMEM19 | |short_description=p5@TMEM19 | ||
}} | }} |
Latest revision as of 17:28, 24 September 2015
Short description: | p5@TMEM19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM19_5end |
Coexpression cluster: | NA |
Association with transcript: | -106bp_to_ENST00000549735_5end |
EntrezGene: | TMEM19 |
HGNC: | 25605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.51e-22 | 52 |
lymphocyte | 1.09e-21 | 53 |
common lymphoid progenitor | 1.09e-21 | 53 |
mature alpha-beta T cell | 4.68e-20 | 18 |
alpha-beta T cell | 4.68e-20 | 18 |
immature T cell | 4.68e-20 | 18 |
mature T cell | 4.68e-20 | 18 |
immature alpha-beta T cell | 4.68e-20 | 18 |
T cell | 1.19e-16 | 25 |
pro-T cell | 1.19e-16 | 25 |
CD8-positive, alpha-beta T cell | 9.11e-16 | 11 |
B cell | 4.55e-12 | 14 |
leukocyte | 3.26e-11 | 136 |
nongranular leukocyte | 6.54e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.27e-09 | 120 |
CD4-positive, alpha-beta T cell | 1.70e-07 | 6 |
hematopoietic stem cell | 3.65e-07 | 168 |
lymphocyte of B lineage | 5.62e-07 | 24 |
pro-B cell | 5.62e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.49e-08 | 114 |